Aniseed - Transcript Card

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S436.g09757.01.t

Possible name(s)

TBC1D19; TBC1D7

Gene model

Boleac.CG.SB_v3.S436.g09757

Location

S436 [38,425 / 40,036]

Sequences

Amino acid sequence

Length: 536

>Boleac.CG.SB_v3.S436.g09757.01.p
MAGVDQAEITYVIAEVISRLKATTLQAQLKEAAKREAEQPGVTKATLKDDIVKGLRNSGW
EKILRNAVYREMNRIRGEGGLSSHITSVVEDLEHRKEPLSYMRXAQENWEKKIMKSMNSM
CSELSIPLARKRPNDEQRDLLQKWNEMGADEPDLSHFRPVYAPKDFLEVIISLRNPNCNM
SNCSKEENGMSSLPGLIQVPLEVPTLSELRTKFAELDPKYTQTGVDDTNEILTQVFSTER
HKLAKKVLDAKESSVSQYFLRRGSPNGTRADMWQSALAVTIDHLSILFXEQLKGYVXQHD
LLVDSLIYXDIXLTATNDDYXFVFEDYLYQVLLVFSRDTSVLKHFDHSSATPPKSYIKGK
WGQEEFAVTYPPXGVIPFHGFSMYVTPLCYLYAEPTRLYMIFREMXTRYFFHLHTISSHP
QGIVSLCLLFETTLQALHPKLFQHLVNIGVQPXRIAFKWLVRAYSGYLSTTQLHLLWDRV
IGFGDLRLLALFAVAIFVFRQSNLLAITQAXGVDVAMADLFSLNVVPLLQMLLFGX

Nucleotide sequence

Length: 1,611

>Boleac.CG.SB_v3.S436.g09757.01.t
ATGGCTGGTGTTGATCAAGCTGAGATAACATATGTGATTGCNGAAGTAATTTCTAGGCTG
AAAGCCACAACATTACAAGCTCAATTAAAAGAAGCAGCCAAACGAGAAGCTGAGCAGCCT
GGAGTCACAAAAGCCACACTTAAAGACGATATTGTGAAAGGCCTACGAAATTCAGGGTGG
GAGAAAATTTTACGAAATGCTGTTTATCGTGAAATGAATAGAATTCGTGGAGAAGGCGGA
TTATCATCACACATCACATCTGTTGTAGAGGATTTAGAACATCGAAAAGAGCCATTGAGT
TACATGCGTTNTGCNCAAGAAAACTGGGAAAAGAAAATCATGAAAAGCATGAACAGTATG
TGTTCTGAATTAAGCATTCCNCTAGCAAGAAAAAGGCCAAATGATGAACAGCGAGATTTA
TTGCAGAAGTGGAATGAAATGGGAGCTGACGAACCAGATTTAAGTCATTTCCGTCCAGTT
TATGCACCGAAAGATTTTTTGGAAGTGATAATCTCCCTTCGTAATCCAAATTGTAATATG
TCCAACTGTTCAAAAGAGGAAAACGGCATGAGTTCCCTTCCTGGATTGATACAAGTGCCA
TTAGAAGTGCCTACCCTATCAGAATTACGTACAAAATTTGCCGAACTAGACCCAAAGTAT
ACTCAAACCGGTGTTGATGATACAAATGAAATATTGACACAAGTATTCTCAACTGAAAGA
CATAAACTCGCGAAAAAAGTTTTAGATGCAAAAGAAAGCTCTGTGTCGCAGTACTTTTTA
CGCAGAGGTAGCCCTAACGGCACAAGAGCAGATATGTGGCAGTCAGCATTAGCTGTCACC
ATCGATCATTTAAGTATACTTTTCNATGAGCAACTTAAAGGATATGTANTACAACATGAT
CTACTTGTNGACAGCCTCATTTACAANGACATCAANCTCACAGCNACAAATGATGATTAC
TANTTTGTTTTTGAAGATTATTTGTATCAAGTGCTGCTTGTTTTCTCAAGAGACACTTCG
GTATTGAAGCATTTTGATCATAGCAGTGCNACACCACCNAAGTCTTATATTAAAGGCAAA
TGGGGGCAGGAGGAGTTTGCTGTAACATACCCTCCAAANGGAGTCATACCATTTCATGGT
TTTTCCATGTATGTTACACCACTGTGCTATCTTTACGCAGAGCCTACTCGACTTTATATG
ATATTCCGNGAGATGTANACTCGCTACTTTTTTCATCTTCACACCATTTCTTCACACCCA
CAAGGTATTGTGTCACTTTGCCTTCTGTTTGAAACTACTCTTCAAGCTTTACATCCGAAA
TTATTCCAGCATTTGGTAAACATAGGTGTTCAACCTTTNCGGATTGCATTTAAATGGTTA
GTGAGAGCGTACTCTGGGTATCTATCAACAACGCAACTCCACTTGCTGTGGGATCGTGTA
ATTGGTTTTGGTGATCTTCGATTGTTGGCNTTGTTCGCGGTGGCGATTTTTGTTTTTAGA
CAGAGTAATCTTCTCGCCATTACACAAGCCANTGGAGTAGATGTTGCTATGGCTGATCTT
TTTTCACTGAATGTTGTGCCGTTATTGCAAATGCTGTTATTTGGTAANTGA

InterProScan

ProSiteProfiles	Rab-GTPase-TBC_dom (IPR000195) - T[263-484] 12.345
Pfam	Rab-GTPase-TBC_dom (IPR000195) - T[380-504] 3.3E-11
SUPERFAMILY	Rab-GTPase_TBC_sf (IPR035969) - T[421-507] 4.05E-14

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TBC19_HUMAN	55.327 %	586	0