- Transcript 'Boleac.CG.SB_v3.S428...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S428.g09605.01.t
Possible name(s)
BCL2L2-PABPN1; PABPN1; PABPN1L
Gene model
Location
S428 [56,569 / 57,145]
Amino acid sequence
Length: 191
>Boleac.CG.SB_v3.S428.g09605.01.p
LETIKASVNEMEDVAETFKEIRNEVEKLIADVASPTSNSPHLXGNAVTSPSAEDKEETDK
RSIYVGNVDYGVTAIELEQYFNGCGSVNRVTILCDKPTGHPKGFAYVEFSDKESVKTSLA
LDGSMLRGRQIKVNPKRTNTPYFHFSRRPRGRGRFRGRGRYGHGYYLSSTRGRRAYGRRP
XAAXFYSPYGV
Nucleotide sequence
Length: 576
>Boleac.CG.SB_v3.S428.g09605.01.t
TTGGAAACAATCAAAGCGAGTGTCAACGAAATGGAAGACGTAGCGGAGACGTTCAAAGAG
ATCCGAAATGAAGTCGAAAAACTGATAGCTGATGTTGCTAGCCCAACATCAAATTCACCT
CATTTGCNGGGTAACGCAGTTACTTCCCCATCGGCTGAGGATAAAGAAGAAACCGATAAA
AGGTCAATTTATGTTGGCAATGTTGATTACGGAGTTACTGCCATAGAGTTGGAACAATAC
TTCAATGGATGCGGTTCGGTGAACAGGGTTACAATATTGTGCGATAAGCCAACAGGACAT
CCAAAAGGATTTGCTTACGTCGAATTTTCTGACAAAGAATCGGTGAAAACTTCACTCGCT
TTGGATGGATCAATGTTGAGGGGAAGACAAATTAAAGTGAATCCAAAGCGCACCAACACG
CCGTATTTTCATTTCTCAAGAAGACCAAGGGGCCGTGGCCGGTTTAGAGGACGTGGACGT
TATGGCCATGGGTATTATCTAAGTTCTACAAGAGGTCGCCGAGCTTATGGTAGGCGGCCT
NGAGCAGCAGNCTTTTATTCACCTTATGGTGTATAA
| PANTHER |
PABP2 (IPR034911) - T[1-189] 4.2E-71 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[49-165] 1.6E-30 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[50-174] 1.4E-26 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[61-138] 17.745 |
| SMART |
RRM_dom (IPR000504) - T[62-134] 5.9E-22 |
| Pfam |
RRM_dom (IPR000504) - T[63-132] 1.6E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PABP2_HUMAN | 56.853 % | 169 | 2.55E-52 |
| EPAB2_HUMAN | 42.929 % | 128 | 7.82E-37 |