- Transcript 'Boleac.CG.SB_v3.S3.g...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S3.g07138.01.t
Possible name(s)
CELF3; CELF4; CELF5
Gene model
Location
S3 [866,944 / 883,975]
Amino acid sequence
Length: 553
>Boleac.CG.SB_v3.S3.g07138.01.p
MVMAVHGATQFLQQGLPNPAGMRGCSNSSSTFGLQVVNNVIPVPSSVAHLSQVESPVSMP
VNGFFPPYTPTMSGTLPYPQVCGTPSNVSMKEVPQKDDDAVKLFIGQVPKTYTDMDLRPI
FEPFGDIYELSVLHDKFTGMHKGCAFLTYCHKISATKAQECLHEKHTLTGMSHPMQVKPA
DTVNKGEDRKLFVGMLSKKQTEEDVRSLFKNFGPIEECTILRTTEGQSKGCSFVKLASAA
AAKAAIDALHGKQTMEGASSAIVVRLADTDRERAVRKMNQLASSYGVTAPVTFQISPYGT
PIPQMAHHQIVAAPGVLPAAGWSPVATALTATTPLGHLTPGSVMPTASGPQSIASIPSTP
QSPAASITTLNLVPQQLLDQSSPFTSAQEAVYPLQTCPAPTPPAIEMVQTPSYAQPPYTV
VYMPSGQYAQLPTQPLTHTQLTSFTPTQTAQPIISNPTAPQKEGPEGCNLFIYHLPADFQ
DHHLAHAFEQYGNVISAKVFIDRATSQSKCFGFVSFDNCASAQAAIRNMNGHQIGQKRLK
VQLKRPKEQSRPY
Nucleotide sequence
Length: 2,959
>Boleac.CG.SB_v3.S3.g07138.01.t
TTACAGTGTTTCCATAGGTATATTCTGGAGAGTATATAATTGTTTGTGACGTGATTAGAC
GTATTTTGTATTGTTCGTCACTGTGATATCTGCATCGAAGCTTCAAAATGGTTATGGCAG
TGCACGGCGCGACTCAATTTTTGCAACAAGGTCTTCCAAATCCAGCAGGAATGCGGGGTT
GCTCAAATTCATCTTCAACATTTGGACTTCAAGTCGTCAACAACGTTATTCCTGTGCCCT
CATCGGTCGCCCATCTATCACAAGTGGAATCTCCAGTTTCAATGCCAGTTAACGGATTCT
TTCCACCGTACACACCGACTATGTCCGGAACGCTTCCGTACCCGCAAGTTTGCGGTACAC
CTTCCAATGTTAGCATGAAAGAGGTGCCACAGAAGGATGATGACGCGGTCAAGCTTTTTA
TTGGACAAGTACCAAAGACGTATACAGACATGGACTTGAGACCAATTTTTGAACCATTCG
GGGATATCTATGAACTGTCGGTATTGCACGATAAGTTCACTGGAATGCATAAAGGATGCG
CTTTCCTCACTTACTGCCACAAGATCTCTGCAACAAAAGCACAGGAATGTCTCCACGAGA
AACATACCTTAACCGGGATGTCTCATCCCATGCAAGTCAAGCCTGCCGACACTGTGAATA
AGGGAGAAGACAGAAAACTATTTGTGGGAATGCTTAGCAAAAAACAGACTGAAGAAGACG
TGAGAAGTTTATTTAAGAACTTTGGACCTATCGAAGAATGCACGATACTTCGAACTACAG
AGGGACAGAGTAAGGGATGTTCATTTGTCAAGTTAGCAAGTGCTGCCGCAGCCAAAGCCG
CCATCGATGCCCTCCACGGAAAGCAAACGATGGAGGGTGCGTCGTCAGCTATTGTGGTCA
GACTGGCGGACACTGACAGAGAACGTGCCGTACGTAAGATGAATCAATTAGCCAGCAGCT
ATGGAGTCACAGCACCTGTTACCTTCCAAATATCACCTTATGGCACGCCAATCCCGCAAA
TGGCTCACCATCAGATTGTGGCTGCACCTGGCGTTTTACCAGCCGCTGGATGGTCTCCTG
TAGCAACAGCCCTCACTGCAACCACGCCACTCGGTCACTTGACTCCGGGATCGGTGATGC
CTACAGCAAGCGGCCCCCAGTCAATAGCGAGCATTCCAAGTACTCCTCAAAGCCCGGCCG
CATCAATTACGACGTTGAACTTGGTCCCGCAGCAATTATTAGATCAAAGTTCTCCATTTA
CGAGCGCACAGGAAGCCGTTTATCCGCTACAAACTTGTCCAGCTCCAACTCCACCCGCTA
TTGAAATGGTTCAGACTCCTTCCTACGCACAACCACCCTATACAGTTGTGTACATGCCGT
CGGGACAATACGCGCAACTTCCTACTCAACCTCTGACCCACACTCAACTAACATCATTTA
CCCCAACACAAACCGCGCAGCCGATCATCAGCAACCCCACAGCGCCACAAAAAGAGGGCC
CTGAAGGATGCAACTTGTTCATTTATCATTTGCCGGCTGATTTTCAAGATCATCATTTAG
CGCATGCTTTTGAACAATATGGAAATGTTATATCTGCAAAAGTGTTCATTGACAGAGCTA
CAAGTCAAAGTAAATGCTTCGGCTTCGTTAGTTTCGACAACTGCGCCAGTGCACAGGCCG
CTATTCGAAACATGAACGGTCATCAAATTGGGCAAAAAAGACTCAAGGTTCAACTGAAAC
GACCAAAAGAACAGAGCAGACCGTACTGATGACACACCTACCATCACTCGAAGCATTTAC
TATTTATCAAGACTTCAAGATTTGACCTACTTTGTACAGAAGACAAACAAAACTGCAAGA
AGTGTAGGATGTTTAATAGCTCGCTATCTCTCACAGCTTTTGACGGTACTATCAATTCAC
CTTTTCTTTTTATCATCCCTATTTACTAATATTATAATCATCGATATATTAAATATTACT
ATGAAAAATTCAACGTTGTGCTGTTGATCATATTTCCAAACTTTTGCTTCCGAATATCAC
GATGATCATTAGCTTTGCTTGCGTTATTGACATTGTTCTCGTTGAAATTTAATGACATCA
TGACATTTTTTGCCGCTATAATTCAGAGGGAAATTTCTGGTCTTCTGTAGAGCACCCACA
CCCAATTTCCAACTGATTATTCTTTACTTCAACGAAATCAAAACGTTAATCGTCGATCAG
TCACTATTTATCTTTAACCCGCGCTAGAGTCCACACATGGCGATTCAGGTTAACCGCGCA
TTAACATCAGTGGTGATTCTACGCCCCAACGCGGAGGAACTAACGACGTCACTGGTTCCA
TTCATGGAACAACAGGAAGCCAGAAAAACCCGTTACCAGGGTGACAACCAACTCATAGTT
GTTGGGGTTGCGGAAACTCACAGGACGAACCTGAGGCTATAACGGGTAAAATTAACCCAA
CGATTATGCTTCAGTCACCTGGCGCCATTCGGTATGACCTGACTTCCTGTACCGCAGGCG
TATGCATCAAGTTTGTCTCACGGTTAATTTAGCCCCGAACAGGGTTGCGACATTACCTCC
ACAATAATTATATTTAAATAATAGGTAGATTCCTATTCATTATTGGCAAACGCCATCAGC
TCGATACCTTGTAAATATTGTATATACATAACCATTTCTCTTGATGATTCCATAGAATAG
CCGGACTGACTCAATTTAGAAGTAGGCCTATGCTTTATTGCCTGGTACTTTTAGAACTTG
CAAACGTTCATACTATTGTCACTTCTCAGACAACTCATCTAATTTGCTTCGATTCATTTA
CTCGGTGTATCACAAGATTCCGGGAACAATAAGAAATGCGCCATTTTGTGCAATTTAGAA
CTGAATATTTCCCCGGTTTTACTTGAAATACACACATACCTGAGTATTGAGTATTAAAGT
TACAATNGAAATTNCCGAT
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[80-182] 1.25E-19 - T[187-279] 9.51E-42 - T[465-549] 9.51E-42 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[87-185] 2.0E-21 - T[186-277] 2.1E-25 - T[431-545] 1.2E-27 |
| CDD |
CELF3/4/5/6_RRM1 (IPR034648) - T[96-182] 9.69806E-53 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[101-182] 13.874 - T[189-269] 16.074 - T[468-546] 16.654 |
| SMART |
RRM_dom (IPR000504) - T[102-178] 6.5E-17 - T[190-265] 4.9E-17 - T[469-542] 2.1E-22 |
| Pfam |
RRM_dom (IPR000504) - T[103-165] 1.0E-14 - T[191-255] 1.1E-15 - T[470-540] 8.7E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CELF5_HUMAN | 46.444 % | 391 | 1.99E-131 |
| CELF3_HUMAN | 47.146 % | 397 | 4.71E-134 |
| CELF4_HUMAN | 45.625 % | 352 | 3.27E-116 |
