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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S2...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  3. Transcript 'Harore.CG.MTP2014.S1...' > 
  4. Transcript 'Haaura.CG.MTP2014.S3...' > 
  5. Transcript 'Boleac.CG.SB_v3.S39....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S39.g08891.01.t

Possible name(s)

AC008764.1; MED26; TCEA2

Gene model

Boleac.CG.SB_v3.S39.g08891

Location

S39 [386,384 / 391,097]

Sequences

Amino acid sequence

Length: 488

>Boleac.CG.SB_v3.S39.g08891.01.p
MLATLSEIRNRLARAVDDNGSVRDMDTAVEAISVLEKTPVTKEALEETRLGLHVNNIRRA
TRNSPLAKRAKNLIKSWQQMIDKKETPFRVQKTRPETPNSLGSSPSPPEPPRNFIVHSHS
SPLLTSHAPRSNTPTFDGKSKKSKKRKTVHDGTKLTKKSDVTDGLLTRKVQSSEVKSQQQ
SFDTGQSKILNGYTTSSKPVAAVKPMINPNPPSSSDRSSSSSVKTQNSKFSMQQKSLKSK
KPLKNSHKVPTQKEDPSHQAPQVSSQAKQQRDKSAPTKLPPAKTNVTSSLKPNQSTVDRL
KISIKTEKTSNNFSSKSETNSFIDKTDDSDTNQDMPSKICPSVDILNSSPGHDDPEKCNS
NCSSSTDFHKIYHEFKKRKTRRKESAFMDMTSLYPMSRLVENLDSDSDGNSSPKSSFSSS
IASPSGAGYNPIHSQYCKLPGVTGCRGNNGSWFDWSQMFCVNHHKGSETLPEEKKVLPLQ
VLPYVELD

Nucleotide sequence

Length: 2,353

>Boleac.CG.SB_v3.S39.g08891.01.t
GTTCGGGCAAGGAGGACCTGAGCTGAGGACGATTTCATGAAAGATTGGGAATAATCATAA
AATGCTCGCTACCCTATCGGAAATTAGGAACCGGTTGGCGCGTGCAGTAGACGACAATGG
ATCCGTCAGAGACATGGATACAGCCGTGGAGGCAATCTCAGTCCTGGAAAAGACTCCGGT
CACGAAAGAGGCACTCGAGGAAACCAGGCTTGGACTCCATGTCAATAACATCCGCCGTGC
TACTAGGAACAGTCCGTTGGCGAAGCGAGCAAAAAATTTGATCAAGTCATGGCAGCAAAT
GATAGATAAAAAAGAAACACCATTCCGGGTTCAAAAAACTCGCCCAGAAACTCCTAATAG
TCTTGGATCCAGTCCTTCTCCTCCCGAACCCCCACGAAATTTTATCGTCCACAGTCATTC
GTCTCCTTTGTTAACGTCCCACGCTCCACGTTCCAACACCCCGACGTTCGACGGCAAAAG
TAAGAAAAGCAAAAAACGGAAAACTGTTCACGATGGAACGAAATTGACTAAAAAAAGTGA
TGTCACGGATGGATTACTAACCCGTAAAGTGCAAAGTTCAGAGGTCAAATCTCAGCAGCA
ATCATTTGATACAGGCCAATCGAAGATTCTGAATGGATACACAACGTCTTCAAAGCCCGT
GGCAGCCGTGAAACCTATGATCAATCCTAACCCTCCATCCAGCAGCGATCGATCTTCAAG
CTCATCAGTGAAGACGCAAAACAGTAAATTTTCCATGCAACAGAAGTCCCTCAAAAGTAA
AAAGCCTCTGAAAAACTCTCATAAAGTGCCTACCCAAAAAGAAGACCCCTCCCATCAAGC
ACCACAGGTTTCATCGCAAGCAAAACAACAACGAGACAAATCAGCCCCCACCAAACTTCC
TCCCGCTAAAACAAATGTCACCAGTTCCCTAAAGCCAAATCAAAGCACCGTGGACAGGCT
GAAAATTTCCATTAAAACTGAAAAGACCTCAAACAATTTTAGCTCAAAATCTGAAACAAA
CTCATTTATTGATAAAACGGATGATTCTGATACAAATCAAGATATGCCATCGAAAATTTG
CCCTTCCGTTGATATTCTCAATTCCAGCCCCGGGCACGATGACCCAGAAAAATGCAATAG
CAATTGTTCGAGTTCTACCGATTTTCACAAAATTTATCATGAATTTAAAAAACGGAAAAC
TCGCCGAAAAGAATCTGCTTTTATGGACATGACATCGCTGTACCCTATGTCAAGATTAGT
CGAAAATCTCGACTCTGATTCGGACGGTAATTCATCGCCAAAAAGTAGTTTTTCCTCGTC
TATCGCATCTCCGAGCGGTGCAGGTTATAATCCTATCCATTCTCAATATTGTAAGTTGCC
GGGGGTGACGGGTTGCCGTGGTAACAACGGGTCGTGGTTTGATTGGTCACAAATGTTTTG
CGTGAATCATCACAAGGGATCGGAAACGCTGCCAGAGGAAAAGAAAGTCCTCCCACTGCA
AGTTTTACCGTATGTAGAGCTCGATTGATTAAAACTGCGTGCGTCAAAGGCTTAGGGCCT
TCGTTGTTTCTGGCGAAGGGGTCTCCTTGTGTCTATTGCACTACCAAAATTTTTTGACAC
AAAGATAGACCTTCCTTCTTGCGTTTCTTTGTCAATGCCGGGCCTCAAGCTATTGCACAG
CTGTCTTCTTGAATCCACTCTAGGCTATGATTTGGGCTTGCTGAATGTAAAAATGTTTGC
CATGGGTTCAGACAAGTCAGCATATAAACAAAAAATGCAAATTTTCGTTAATTTTGAGTC
GTGTGAAAATGAGATGCATTTGTGATTGGTGCTTACAGAAATTGTCCGTGCTGCGATTGG
TAGCTTTTTATGAGGCCCTAAAATCTCATTCGCATTACCCAAGGTTGAAGTGACGAACTC
AAACATTAGATACCGTTCTTGTTGGGATGTGAAAATTTAACTGTGATGGGTCTTGCATGA
TGCATTTGGGAAGACTTGTCTATAGATCGTGATCATGGTCACTGGCCCAGGTCCACGCCT
TGGTAGCGAATAGAGTTGTGTCATGAAATTCAAACAGTGATCACTAAGCAACAAGCCCCT
CAGCTTCTGCCATGCGAATGACAGGCATTTCCAAACCATATGCACGACTTCAAGGTATCA
AAAGCTGAAATCTTAAGTAGGAATAATTCTCTGCTGCTGACTATAGACGTTCACGTTTCA
TGGTCATGCTCTTGCATTCTGCCGGGTTTTCTTGGATATGTTGTTACTGTGCTATCGGTT
AGAGTGTGCGATGCACCTTCAATATTTCTTTGTGGCGATATTTGACGGAATATCTTACTG
ATGTATTGAATCA

InterProScan

Gene3D
TFIIS/LEDGF_dom_sf (IPR035441) - T[2-94] 1.1E-17
ProSiteProfiles
TFIIS_N (IPR017923) - T[7-84] 17.265
SMART
TFIIS/CRSP70_N_sub (IPR003617) - T[9-83] 6.4E-15
SUPERFAMILY
TFIIS/LEDGF_dom_sf (IPR035441) - T[12-85] 1.11E-15
Pfam
TFIIS_N (IPR017923) - T[31-81] 1.4E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MED26_HUMAN 52.5 % 94 2.01E-20