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TRANSCRIPT CARD

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  1. Molecular Tool 'ZicL mRNA'
  2. Transcript 'Boleac.CG.SB_v3.S389...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S389.g08835.01.t

Possible name(s)

STX10; STX6

Location

S389 [89,412 / 95,474]

Sequences

Amino acid sequence

Length: 259

>Boleac.CG.SB_v3.S389.g08835.01.p
FYVQYDRKYCGLLENFTTCQNLRIVQISEYTQPQDVSRRSILCCQKRGRKISRELPWNAK
TMADVIFKRKCNEAKFKISQPELLERKSFISSTRKVIQQMKNEISSPEVKAKLEDLSKKS
LLRNGLHKVGYGSQQNGGYVSHTLHTDIDIEGDENDHFINDTEQQQRMIIEQQDDQLDLV
ADSVGILKTMSRSIGDELDEQSVMLEGLGNDMENTQSKMDSVLRKMAKVTHMSNDRRQWC
AIGVLGGSMFLVFLLFFLL

Nucleotide sequence

Length: 1,732

>Boleac.CG.SB_v3.S389.g08835.01.t
TTTTATGTGCAATACGATAGGAAATATTGCGGACTTTTAGAGAATTTTACAACTTGCCAA
AATTTGCGGATAGTACAAATCTCGGAATACACTCAACCACAAGATGTCAGTAGAAGATCC
ATTCTTTGTTGTCAAAAGCGAGGTCGAAAAATCAGTAGAGAATTGCCGTGGAATGCAAAA
ACGATGGCGGACGTTATTTTCAAGCGAAAGTGCAATGAAGCAAAGTTCAAAATCAGTCAA
CCAGAACTGCTAGAAAGAAAATCGTTCATTTCGTCAACGAGGAAAGTAATTCAACAAATG
AAAAATGAAATTTCGAGCCCTGAAGTCAAAGCAAAGTTGGAAGACCTCTCCAAAAAGAGT
CTACTTCGTAACGGACTTCACAAAGTGGGGTACGGAAGTCAACAGAACGGAGGTTACGTG
AGCCATACGTTACACACGGACATTGACATTGAGGGAGACGAGAACGACCATTTCATTAAC
GACACAGAACAACAACAACGAATGATTATCGAACAACAAGACGACCAACTTGACCTCGTT
GCTGACAGCGTAGGGATTTTGAAAACCATGTCAAGGTCAATCGGTGACGAACTTGACGAG
CAGTCTGTTATGCTGGAAGGTCTAGGCAACGACATGGAGAATACGCAATCAAAAATGGAC
TCGGTTTTAAGAAAGATGGCAAAAGTAACGCATATGTCTAACGATCGGCGCCAGTGGTGT
GCAATCGGAGTTCTCGGTGGTTCCATGTTCCTCGTTTTCTTGCTCTTCTTTTTATTGTGA
TAACCGCAACATTCCTCACCAGTCTACGAAGACTTGCATCAACAGCCCCAACTTGTGGAC
AGAACTGTCACTGAACCCGGTGCCATCCAGTGTACACAACTGATGGACATAGTATCAAGA
ATATTTTTCCATAACCGACTGATACAGCTCTTTTGGTTATCATTTTCCAAACCAACTTCG
CATCACCCTGCAAACTTGTTGCCAGGTAACAATATGTTCCGGCTCAATGAACACATCAAG
TGGACTTGCTTCCCGACCGTGGACAATCATGGCCGTTCCGTATCTTTGTCATTAAAGATT
GCCAACCTACCCAAGTGCTGCGTGGCATGGCTCCAACCCGAGTCGGCCATGTGTGGGTAT
GAAATGAAATAGTGGAGAGGGAAGTTCCCAAAAGGGGGGACAGGCTGAAATGCTACCAAA
GATGGGGCCGGAAAGGGCCCAACGGCCTTTGCACTTGCACTTCGGCACCATGGCAGGAAA
TGTGCCTCCCAAATTTGGATTTCTTACCCTCCTCCACTGCCGTTGTTACAAGGAAGACCC
CGGGTTTCTCACTTATAAGTTGCTGCCACCACCCAGAAACCTCCATTTCAGCCGGGCTAT
GTAACGTGTCCTATGAAGGCCTTTAGTGTTGGGGACCCGTCAATAATGCCCGTCCGTATA
TTGCTTTTTGTGATGTCGTGGATGGCTCCCCTATGTGTTGGATCACAGACTGTACTTGAA
CGAACGCTTGAAAAATATTCTGTGTGACGTCATGAAAATATTTGATTACGTCACTTTTGC
TGCTGCAAGAGTCTGCCTGTTTTCTGTGTCTTTGCATAATTTTGATTTTCCTCGTTTTAT
TTATTTGCCAATCGTAAGAATGAAATGTCTGAACCTCATCGTTGACGGGTTTTTTAGTTT
GGGCGATTTGACCACAGTGAGTGGTGTGTGGTGAGACCAGCGATGAGCACTG

InterProScan

SMART
T_SNARE_dom (IPR000727) - T[162-229] 2.2E-5
ProSiteProfiles
T_SNARE_dom (IPR000727) - T[167-229] 15.315
Pfam
T_SNARE_dom (IPR000727) - T[204-255] 3.8E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
STX6_HUMAN 39.151 % 157 1.79E-47
STX10_HUMAN 36.126 % 133 6.6E-38