- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Boleac.CG.SB_v3.S37....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S37.g08530.01.t
Possible name(s)
HNRNPL; HNRNPLL
Gene model
Location
S37 [312,246 / 317,441]
Amino acid sequence
Length: 447
>Boleac.CG.SB_v3.S37.g08530.01.p
MNSYDGGPGMKRPRIKQEYDDNGHMEPQAKFSRGPPPTPNKVLLFTIINAIYPITTKVME
SICKDSGEVQRISAQQAKATLNGADIYSGCCTLKIEYARPTQLNVYKNDNDTWDXTGALD
VEETGSEPLLGDAPAGYEVGNYGGMGMAPMGQRPPMHGMGPRPRPPMGGQGMRGRGGMMH
GRPRASMMAPPIQNQIPEYDFSLEDYGQNSGGSVSPVVMVYGLRPEKMNCQKLFNVLCLY
GNVLKVKFLKSKPGTAMVQMGDPMSVDRAIHNLSGVQFFGEKLVLAPSKQMYLTDSGQIG
ELDDKTPSFADFSNSKNNRFTTTEQAAKNRIQKPAPVLHYFNAPVEMDEANVRQMCEEFS
VASPTKFTPFKSRSERSSSGLLEFADKSDALECLTMLNHYKLENPTAHQIISRFQARGER
LKELQQNLCTIMKKYRVMEIIPDEDSV
Nucleotide sequence
Length: 1,472
>Boleac.CG.SB_v3.S37.g08530.01.t
GTGCCAGCTTCATTGATTAGCTTCAACAGTCCTATCTCCTCCTATCTACTTCGTATCGGC
CTCGTTATTTTGTTGGTCAGTCATTACGGTAATTGTAGATTGCGTAGAGCGACAAGAAAA
GCGTCAAAATGAATTCCTATGATGGTGGTCCCGGCATGAAAAGGCCAAGGATAAAACAAG
AATATGATGACAATGGCCACATGGAACCGCAAGCAAAATTTTCACGAGGACCCCCTCCGA
CTCCTAACAAAGTTTTGCTTTTCACAATCATCAATGCAATTTATCCAATCACCACAAAAG
TGATGGAATCGATATGTAAAGACTCTGGAGAGGTTCAACGTATATCAGCACAGCAAGCTA
AAGCTACCTTGAACGGTGCTGATATCTATTCCGGTTGTTGTACCCTGAAGATTGAGTATG
CCCGACCAACTCAGCTGAATGTGTACAAAAATGACAATGATACGTGGGACTANACCGGTG
CGCTTGATGTTGAAGAAACAGGCTCAGAACCATTACTGGGTGATGCCCCTGCTGGTTATG
AGGTTGGAAATTATGGAGGAATGGGTATGGCTCCAATGGGTCAAAGACCACCAATGCATG
GAATGGGACCACGGCCACGACCACCTATGGGTGGTCAAGGGATGAGAGGACGAGGTGGAA
TGATGCATGGTAGACCTCGGGCAAGCATGATGGCACCTCCTATCCAAAATCAGATACCTG
AGTATGATTTCAGCCTTGAAGATTATGGTCAAAATTCAGGAGGCAGTGTCAGCCCAGTTG
TCATGGTGTATGGGTTGAGGCCAGAGAAAATGAACTGCCAAAAATTATTCAATGTCCTTT
GCTTATATGGAAATGTGCTCAAGGTTAAATTCCTGAAAAGCAAGCCTGGCACTGCTATGG
TGCAGATGGGGGACCCAATGTCTGTAGATCGTGCGATTCACAACCTGTCGGGGGTACAAT
TCTTTGGAGAGAAACTGGTTTTGGCGCCATCGAAGCAAATGTACCTCACTGATTCTGGCC
AGATAGGAGAGCTGGACGATAAGACCCCAAGTTTTGCAGATTTTTCCAATTCGAAGAATA
ATCGGTTCACTACCACAGAGCAAGCAGCGAAAAACAGAATACAGAAACCAGCTCCAGTTT
TGCATTATTTCAATGCACCTGTTGAAATGGATGAAGCAAACGTGAGGCAGATGTGTGAAG
AATTCTCCGTAGCATCACCGACTAAATTCACGCCATTCAAGTCTAGAAGTGAGCGAAGCT
CTTCTGGATTGCTTGAATTTGCTGACAAAAGTGATGCCTTAGAATGCCTGACTATGTTGA
ATCATTATAAGCTGGAAAACCCCACAGCTCATCAAATTATTAGCCGCTTCCAAGCAAGGG
GAGAAAGATTGAAAGAATTGCAACAAAATTTATGTACAATCATGAAAAAATACCGAGTTA
TGGAAATCATTCCAGATGAAGATTCAGTATGA
| TIGRFAM |
HnRNP-L/PTB (IPR006536) - T[32-406] 6.6E-92 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[71-119] 5.4E-13 - T[213-313] 1.4E-28 - T[324-415] 9.8E-27 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[162-287] 4.25E-12 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[216-290] 9.746 |
| SMART |
RRM_dom (IPR000504) - T[217-286] 6.4E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PTBP3_HUMAN | 26.396 % | 99.8 | 1.88E-22 |
| HNRPL_HUMAN | 49.136 % | 332 | 2.73E-108 |
| HNRLL_HUMAN | 42.893 % | 290 | 5.91E-93 |