Aniseed - Transcript Card

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S366.g08417.01.t

Possible name(s)

YOD1

Gene model

Boleac.CG.SB_v3.S366.g08417

Location

S366 [11,706 / 12,606]

Sequences

Amino acid sequence

Length: 299

>Boleac.CG.SB_v3.S366.g08417.01.p
MLRLRCKSETGTQVITGLGSSSTLQDLMNEIQKMTGVLTQHQRILFGYPPXSLDLXDSSC
TLSSLSVRSGXTFTVVNKDPSXDASTGEXQQSKAPAESPGVKRMEVPADNSCLFYSVFYV
FNGFLEYERAKELRRKIAMKVISDPDRFSTAFLGKTPDEYSAWIQSDTSWGGAIELSILS
EIYATEIAAIDIKTTRLDIYGQDXMYXGRVYXVYDGIHYDPLYFDPCDRQFPNQTLFTVS
DDNMLTKVIEFGEEANKARQFTDTANFSLICLNCQKKFKGQAEAQAHGKQTGHANFSEC

Nucleotide sequence

Length: 900

>Boleac.CG.SB_v3.S366.g08417.01.t
ATGCTCCGCTTGCGATGTAAGTCTGAAACAGGGACTCAAGTGATAACCGGACTTGGTTCT
TCATCCACATTACAAGACCTAATGAATGAGATTCAAAAGATGACTGGTGTTCTAACGCAG
CATCAACGTATATTATTTGGGTACCCTCCAANGTCATTGGATTTGNATGATTCTTCCTGT
ACGTTGTCATCACTTTCTGTAAGATCTGGTGNTACTTTCACTGTGGTTAATAAAGATCCT
TCAANAGATGCCTCCACTGGCGAACNTCAACAATCTAAAGCCCCTGCGGAGAGTCCTGGT
GTTAAAAGAATGGAAGTGCCTGCTGACAATTCATGCTTGTTCTACAGTGTTTTTTATGTA
TTCAATGGATTTCTAGAATATGAACGTGCGAAAGAGCTTAGAAGAAAGATTGCAATGAAG
GTGATATCAGATCCTGACAGGTTTTCAACAGCTTTTCTTGGCAAAACACCTGACGAATAC
AGCGCCTGGATCCAGAGTGATACTTCTTGGGGTGGTGCTATAGAATTGTCTATTTTGTCT
GAGATCTACGCCACTGAAATTGCTGCTATCGATATCAAAACCACAAGGTTAGATATTTAT
GGACAAGACAANATGTATTNGGGTAGAGTGTACNTGGTNTATGATGGAATACATTACGAT
CCACTCTACTTTGATCCATGTGATAGGCAATTCCCAAATCAGACTCTTTTCACTGTGAGT
GATGATAACATGCTGACTAAAGTAATTGAATTTGGTGAAGAAGCAAATAAAGCAAGGCAA
TTCACAGACACTGCAAACTTTTCTCTGATATGCCTTAACTGTCAAAAAAAATTCAAGGGC
CAGGCCGAGGCNCAAGCACATGGAAAACAAACTGGTCATGCAAACTTCTCCGAGTGCTGA

InterProScan

SUPERFAMILY	Ubiquitin-like_domsf (IPR029071) - T[1-77] 4.73E-8
ProSiteProfiles	Ubiquitin_dom (IPR000626) - T[2-82] 9.896
ProSiteProfiles	OTU_dom (IPR003323) - T[101-225] 10.87
Pfam	OTU_dom (IPR003323) - T[108-202] 3.7E-5
ProSitePatterns	Znf_C2H2_type (IPR013087) - T[271-293] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
OTU1_HUMAN	46.026 %	268	7.03E-89