- Transcript 'Boleac.CG.SB_v3.S803...' >
- Transcript 'Harore.CG.MTP2014.S5...' >
- Transcript 'Haaura.CG.MTP2014.S5...' >
- Transcript 'Boleac.CG.SB_v3.S359...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S359.g08293.01.t
Possible name(s)
SNX13; SNX14; SNX25
Gene model
Location
S359 [91,688 / 116,519]
Amino acid sequence
Length: 972
>Boleac.CG.SB_v3.S359.g08293.01.p
MDSVAKNVQSWGTFWLFVAGLLLASTLGPIGILCFIFTAVCFMVGIIAMLCHHVNHSTDV
RQFCMVTDSNRKISNGGIEKALNANLGWMPFESEVQLTGSASIDSNLKECLVYLIRDYVE
YWYNDLSDDKDFIKNFQDTLNEVTRQISTNAKRIDWQTFLTTQLVDDFASHANDSSGESQ
DSMSISSSNSALNKTDAPKSANPSIIDTFFECEINVEKVCREIVSCDKEKQVMYFQELSE
VLLYLLLPPKELHCLPLKALLKEILVQGVFLPLLNLYSDPDYLNQYINWLVSDNCLTSEA
FLSVTRHSSEVGELIAIRDITDEEIARTRARDGVGDDPSVKQQLNSMEYVRILCENRINK
LQTGEMVFENDYDQNYESLISDKSSTLYNLPLNTTLRNNIALQFFIDYMQSVEMQAYLFF
WLTVDGYRASAEQQLNAVKMQQLSGQVKGTPNMEMLRAIGKNIYEQYLSKTASPRVELDP
VADKEIQRRLDNEEPSPNVFDELQKKVFIIMQRDEKLYPAFKKSPRYVRLLAELDLLRDC
STQSTEEANGNEPVSNVDDISSEAEESNAKFKALITQTGICNEHGKSYALFAINVIRFWP
GSDGSIKLDKWDTFRRFSEFSDLHESLKEHGSNLGNLKLPXKTIFKDLNEEFLERRRLDL
NEYLKNVLSLEHTPKAMESIHTFLDAKAYQKNSRTLKKKMDTVVRNSMRSVTNFVMNAPD
QLMDGFQKAQDKVSGGFQRISTRRIGSSDKLDDEGLLFDDCRVSEQITATQIEGNIPLRI
ILLLMDEIFDLKHRNQWLRRQIVAALQQLIKAVFGDRMNRKIIEFVDNAVAAEQVSDYVS
KFRDSFWPNGILAETPIKRDEASRMRTRVLTKSKXLGAIPDELRPLVGSETSRRGVMRVF
ELFQHPELNSRLFIVLLEGLIKNLFPNNKFQVLFEKFHSNSPKMRARKRERMSKQPNRRG
TVTRKGITRSRR
Nucleotide sequence
Length: 4,851
>Boleac.CG.SB_v3.S359.g08293.01.t
TTGGCTGCAGATTCTGAATAGTGAATGTCGTAGCCTATATGGAATGGAGGGAGTGGACTG
GTTTTCTGGAAATATCTAAGCTTGCCAGTAAATATTTAGCTATATTAATGTAAAATTCAA
CTGTGGCTTCCATTTGTGAAGCCTGGTAATGGATTCTGTGGCAAAGAATGTGCAATCATG
GGGCACATTTTGGCTATTCGTAGCTGGTTTATTGCTTGCCTCCACTCTGGGACCAATAGG
GATACTCTGCTTTATATTCACAGCCGTTTGCTTCATGGTCGGCATAATAGCAATGCTTTG
CCACCACGTAAACCACAGCACTGATGTCAGGCAATTTTGCATGGTGACTGACTCAAACCG
AAAGATATCAAATGGAGGGATTGAAAAGGCATTGAATGCGAATCTTGGATGGATGCCGTT
TGAATCAGAGGTGCAACTCACTGGATCAGCAAGTATAGATTCAAATTTGAAAGAGTGCTT
GGTGTACCTGATTCGGGATTATGTGGAGTACTGGTACAACGATCTGTCGGATGATAAAGA
TTTCATAAAGAATTTCCAGGATACATTAAATGAAGTGACGAGGCAAATTAGCACAAACGC
CAAAAGAATTGACTGGCAGACTTTTCTCACAACACAGCTTGTTGATGATTTTGCGTCTCA
TGCCAATGATTCTTCAGGTGAAAGCCAGGACAGTATGTCTATATCATCAAGTAATTCAGC
GCTCAATAAAACAGATGCTCCCAAGAGCGCGAATCCAAGCATCATCGACACATTTTTTGA
GTGTGAAATCAACGTTGAGAAAGTCTGCCGTGAGATAGTCTCNTGCGACAAAGAAAAACA
AGTCATGTATTTTCAGGAACTCAGTGAAGTTCTACTTTACCTTTTACTGCCACCCAAAGA
ATTGCATTGCCTACCGTTGAAAGCACTGTTGAAGGAGATTCTCGTTCAAGGCGTATTTTT
ACCACTCCTAAATCTTTATAGTGACCCTGATTACCTCAATCAATACATCAACTGGCTGGT
TTCAGATAATTGTCTGACTAGTGAGGCCTTCCTTTCTGTAACTCGCCATAGCTCTGAAGT
GGGCGAGCTCATTGCTATAAGAGATATCACAGATGAAGAAATCGCCAGGACCAGGGCCAG
GGATGGTGTTGGAGATGATCCCTCTGTCAAGCAACAACTCAATAGCATGGAATACGTGCG
GATTCTGTGTGAAAATCGAATTAATAAATTGCAGACTGGAGAAATGGTGTTTGAAAATGA
CTACGATCAGAATTACGAATCCTTGATCTCTGACAAATCATCGACGCTTTACAATCTTCC
ACTTAATACAACCCTTCGAAACAATATTGCTCTTCAATTTTTCATAGATTATATGCAATC
AGTTGAGATGCAGGCTTATCTTTTTTTCTGGTTAACTGTTGACGGATACAGAGCTTCTGC
TGAGCAGCAATTGAATGCCGTCAAAATGCAGCAGCTTTCTGGTCAAGTGAAAGGTACTCC
AAACATGGAAATGCTCAGAGCTATTGGGAAAAACATATATGAACAGTATTTGAGTAAAAC
GGCTAGTCCAAGGGTAGAGCTAGATCCTGTGGCTGACAAAGAGATTCAAAGAAGGCTTGA
CAATGAAGAGCCTTCCCCAAATGTATTTGATGAATTGCAAAAAAAGGTTTTCATCATAAT
GCAAAGAGATGAAAAACTATATCCAGCATTCAAAAAGAGTCCACGCTATGTGAGGTTGCT
TGCCGAACTGGACCTTCTTAGAGATTGTAGTACTCAGTCAACAGAAGAAGCTAATGGNAA
TGAGCCAGTGTCAAACGTGGATGACATTTCAAGTGAAGCAGAGGAGAGCAACGCCAAATT
CAAAGCTCTTATAACACAAACAGGTATTTGCAATGAGCATGGGAAATCGTATGCCTTGTT
TGCCATCAATGTGATCAGATTTTGGCCCGGCTCTGACGGTTCAATTAAACTTGATAAATG
GGACACGTTTCGAAGGTTTAGCGAATTCAGTGATTTACACGAAAGCCTGAAAGAACATGG
TAGTAACCTTGGCAATCTGAAGCTCCCTANCAAGACGATATTTAAAGACTTGAATGAAGA
ATTTCTGGAGAGAAGGCGGTTAGACTTGAATGAATATTTGAAAAATGTTTTGTCGTTGGA
GCATACTCCAAAAGCGATGGAAAGTATACACACTTTTCTTGACGCAAAGGCGTACCAGAA
GAACAGCAGGACTTTGAAAAAGAAAATGGACACTGTTGTAAGAAATTCCATGCGAAGTGT
CACCAATTTCGTAATGAATGCTCCTGATCAGTTGATGGATGGCTTTCAAAAAGCACAAGA
CAAAGTTTCTGGAGGATTTCAAAGAATCTCCACCAGGAGGATAGGAAGTTCTGATAAACT
TGATGATGAGGGGTTATTGTTTGATGATTGTCGCGTTTCGGAACAGATTACCGCAACACA
AATTGAGGGAAATATCCCACTTCGTATTATTCTTCTGTTGATGGATGAAATCTTTGATCT
GAAGCACAGAAATCAATGGCTAAGGAGGCAAATTGTTGCAGCACTTCAACAACTTATCAA
AGCTGTTTTTGGCGACAGGATGAATCGAAAAATTATAGAATTTGTTGACAATGCTGTGGC
TGCCGAACAGGTGTCTGATTATGTTTCGAAATTCCGTGACTCATTTTGGCCCAATGGTAT
TCTGGCGGAAACGCCGATCAAAAGAGATGAAGCTTCTAGAATGCGAACAAGGGTGCTTAC
GAAATCAAAATTNCTTGGTGCTATACCTGATGAGCTGAGGCCACTCGTTGGTAGCGAGAC
ATCACGCCGCGGGGTGATGCGCGTCTTTGAACTCTTTCAACATCCAGAGTTAAACTCGAG
ACTTTTTATTGTTCTGTTAGAAGGATTAATCAAGAATCTTTTTCCGAATAACAAATTTCA
AGTGCTGTTTGAAAAGTTCCATTCTAATTCACCGAAAATGCGAGCGAGAAAACGAGAAAG
GATGTCAAAACAACCGAACCGACGTGGAACAGTGACACGTAAAGGAATCACAAGGTCGAG
ACGATAGCGTGATCTTGCACTTGTCTCCATTTTTGATCTACTGTACTTACACACGAATTT
CTCATGCATTTATTTTATGCTACACGATCCAGACCCTCCTCCACTCTGTGATGTCCCAAA
CGTGCAATTAACAAACCATGAGATATATATAAGTTATTGGTAGCCAACAAGAAGTCATCC
TTTTATCGTCAGATATTCATGCACTGACGTGACTATACGCCAGAATGAAATGCCATGNTG
TTGCTTGCAGTCTTAAGAGCCGAGATTACTTGGTACTCCATAGTTGTTTGGATGTTGTGA
ATTCTTTTGCAGTAATGTGATTCACATCGCCATCTAGTTCGATCTATCTATCTTCACGCC
TCTCACCTTTGACCTGACTTTCGGACGTCTCATTTCTCAAGTGCGATATGTGGGGATAGC
GACTGTGAAATACCAGGTCATTCCCATGGCAATGTACTGTTTGTCACATCATAAAGTTGC
TCGTGACGCTGTTGTGACGTATAGTGCTCACTCTTTGTTCGCTGATGACGTATTACGATA
AAAAAAGAATGTCAAAGGCGGGGCGGTCGCACTTCCGCTTTTATCAACTGGCTGAACTCG
GAAATGGGCTCGGAAATCTTGAAGTACTTTCACCATACGATCGAAGTAACTCTACAGTTT
GCGTTGATCCGTTGGCAATAACACTGATAAGCAATAGNTGCGTATACCGACAATAATTGA
CGACGTAGTGAACGGTTGATGTCTTTGTATGGCAATATGTTTATGAAATCAAATCAAATC
GGATTGAATGTGGGCTAGCCACTTACAAAGTTCTAATCCACTGGCANTGGTATTCTATTA
AAAAAATCGTATTCCATGTCNCTAGACAAGGGTAATCTCTCATGCGGCATTTCAACAGTG
ATCTATGACTATCATCACAAATCGAATCCAATATCGGCGTGCAATACATCAAAACTCTTT
CAAATATACTCTGAAAATGTTTCACGNAATTTCAAGGGTCGCAGGCATTTTTGTAAGATC
ATGGCCTACTTTAGTCGTAAAAGTAAGTAAGTGTATTCCATGACTGGTTGCATTGGGAGA
GGCTGTCGACTTCTTTAGCTTTCCTATTATTAAGCTTTGTGTTTCTTCTTGTGTGCAATC
TGTCAAATTGAAAGTTGATAATAATTAATATTGTGAATAGTAGTTGGATGATTTGAGAGT
ATCGGATAACTTAAATTTTGGAGAATTAATGTTTTATGACTACGAAGAGAGCAGGATATT
TTCTATTCTACCTACGGTTTTTTTTCTACGCCACTCGGCAGTTTCGATTTTGTTTTGTTT
CTATCCGTGACAAGCAATGACCTGACTGTTAGTGTGACTGTGGCTGGTGACCTTAGGTTA
TTGCAAACGAATGAGTTCCCCTTCGGTTACTTTGACAAGTCGATTTCTTACTTCCCATGT
AATTNAGCTGATTTGAATCCACTAGTATCTGTGTTGTTCGAACCCTGCGAATGTGACTGA
GTGTATTTTATTCTCGTAGTGACTGATGAGTTTGCATACTGGGTCTCCCACGTTATTACG
TCGGGCTACGATATAGTGACAGTTTACAGACTTGGTTTCTAGTTTCCTATCCCGTATCAG
ATTCCGCAGTTTTCGTTGCTTGAAGACCGCGTTGCCAACGGGATTCTTTCCGTATATATA
ATGTAGTTTCGGTTTCTGGGATTGAAACCAGAATATTTGCTGTACTCACTGTGACACCAT
GTCTATCTTGTGAAACATATCAAAAGTGATGAATAAAAATTCAACTTCATA
| SMART |
Phox_assoc (IPR003114) - T[100-295] 2.8E-26 |
| ProSiteProfiles |
Phox_assoc (IPR003114) - T[100-295] 37.27 |
| Pfam |
Phox_assoc (IPR003114) - T[101-290] 1.2E-37 |
| SUPERFAMILY |
RGS_sf (IPR036305) - T[386-534] 3.4E-23 |
| SMART |
RGS (IPR016137) - T[391-531] 3.4E-25 |
| ProSiteProfiles |
RGS (IPR016137) - T[391-531] 15.669 |
| Pfam |
RGS (IPR016137) - T[393-529] 5.1E-17 |
| CDD |
SNX13_RGS (IPR037896) - T[396-529] 1.10141E-61 |
| Gene3D |
PX_dom_sf (IPR036871) - T[568-699] 2.3E-20 |
| SUPERFAMILY |
PX_dom_sf (IPR036871) - T[569-687] 7.46E-18 |
| ProSiteProfiles |
Phox (IPR001683) - T[569-691] 14.453 |
| SMART |
Phox (IPR001683) - T[572-687] 3.5E-13 |
| Pfam |
Phox (IPR001683) - T[583-685] 9.5E-15 |
| Pfam |
Sorting_nexin_C (IPR013937) - T[797-906] 1.0E-24 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SNX13_HUMAN | 39.17 % | 675 | 0 |
| SNX25_HUMAN | 26.879 % | 118 | 4.99E-27 |
