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TRANSCRIPT CARD

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  1. Clone 'cima8107985' > 
  2. EST 'AHC0AAA226YM12_RM1' > 
  3. Clone 'cien42555' > 
  4. Transcript 'Boleac.CG.SB_v3.S34....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S34.g07997.01.t

Possible name(s)

LRRC73; NLRC3; NOD1

Gene model

Boleac.CG.SB_v3.S34.g07997

Location

S34 [162,098 / 163,001]

Sequences

Amino acid sequence

Length: 300

>Boleac.CG.SB_v3.S34.g07997.01.p
MIGGSVQISSEELSSPDVRDICDSLKSDGIKLLSIRGCKMDDRDFHRLMKALGKSHSILQ
LNLNLGVITDQNRVAMLADALSVNRSLETLLLHGTNLGDAGLSVLTKSFSDHPSLICLDL
GDCGITDIGVRYLTSLLPPDGAKKGLLELTLSANTQITDIGWSHLFCAISASSQLRTLNL
DYNNIGDYVAGLFTVTMAGNRSLCTVDFEGCGITNKGASVILDMLESYPTPLQDLILAGN
KISHNLQQDIESCLRQEDDSYLTAQLVPEQKDWVPQSTRAILPERARTSPAKITTAPALF

Nucleotide sequence

Length: 903

>Boleac.CG.SB_v3.S34.g07997.01.t
ATGATCGGCGGATCGGTACAAATTTCAAGCGAAGAGTTATCTTCTCCAGATGTACGAGAC
ATTTGTGACTCTTTAAAATCAGACGGAATCAAACTGCTCTCGATACGAGGATGCAAGATG
GACGATCGCGATTTCCACCGCTTGATGAAGGCTTTGGGAAAATCCCATTCAATTCTCCAG
CTGAACCTGAACCTTGGAGTTATTACCGATCAAAACAGAGTGGCAATGCTGGCTGATGCT
CTCAGTGTAAATAGAAGTTTGGAGACGTTGCTTCTTCATGGTACAAATCTAGGAGACGCT
GGACTCAGTGTGCTCACAAAATCTTTCTCCGATCATCCATCATTGATTTGCTTAGATCTT
GGTGATTGTGGCATCACTGACATTGGTGTACGATATTTGACAAGTCTCCTACCGCCAGAT
GGCGCAAAGAAAGGTTTGCTTGAATTAACATTGAGTGCGAATACGCAAATTACAGATATC
GGTTGGTCACATTTGTTTTGTGCGATATCGGCAAGCTCACAACTACGTACGTTGAACTTG
GATTATAACAACATTGGAGATTATGTAGCTGGTCTATTCACTGTTACTATGGCTGGAAAT
CGCTCTCTTTGCACCGTTGATTTTGAAGGTTGTGGAATAACAAATAAAGGGGCTTCTGTT
ATTTTAGACATGTTGGAGAGTTACCCAACGCCTTTGCAGGATTTGATACTTGCTGGGAAC
AAAATTAGCCATAATTTGCAGCAAGATATTGAAAGTTGCTTGCGACAAGAAGATGATTCN
TATCTAACAGCTCAATTGGTACCCGAACAGAAAGATTGGGTGCCACAATCTACCAGAGCT
ATTCTCCCAGAAAGAGCACGCACATCTCCGGCTAAGATTACTACAGCTCCGGCTTTGTTT
TAG

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[5-138] 7.0E-21 - T[139-280] 8.0E-19
Pfam
Leu-rich_rpt (IPR001611) - T[113-131] 0.073 - T[172-187] 0.12 - T[200-221] 0.7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LRC73_HUMAN 52.8 % 261 2.33E-86