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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S343...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S343.g08080.01.t

Possible name(s)

LGR4; RXFP1; RXFP2

Location

S343 [110,906 / 111,718]

Sequences

Amino acid sequence

Length: 188

>Boleac.CG.SB_v3.S343.g08080.01.p
MAFRRGRYYSINSVCIPKFFVTTSDSSWGFSFFVTLFNFCSFLFVASAYAMIYVQSRKRA
EMRSSTRHNDKVVTDLQKKILRLIVTDFFCWIPLCIIAFAKLSGAYVSENAYVFAAIFLL
PINSAINPLLYSDLPDFLYRSVKKRLGNETSSGEGEASKQISSNNERRMTDSTYVLSDKR
NKSNNSNK

Nucleotide sequence

Length: 564

>Boleac.CG.SB_v3.S343.g08080.01.t
ATGGCCTTTCGACGAGGCAGGTACTACAGTATCAACAGCGTCTGTATTCCAAAGTTTTTC
GTCACCACTTCCGACAGCTCGTGGGGTTTCTCATTCTTTGTAACCTTGTTCAACTTCTGT
TCGTTTCTCTTCGTCGCCTCTGCCTACGCGATGATCTACGTTCAATCGAGAAAGCGAGCG
GAAATGAGATCTTCAACGAGACATAATGATAAAGTAGTTACAGATCTGCAGAAGAAAATC
CTTCGTCTCATCGTGACAGACTTCTTCTGTTGGATTCCATTATGCATCATTGCATTCGCT
AAACTATCCGGAGCCTACGTCAGCGAAAACGCTTACGTATTTGCAGCGATTTTTCTTCTG
CCAATCAACAGCGCGATTAACCCTCTCCTCTATTCTGACCTGCCTGATTTTCTCTACCGT
TCTGTCAAGAAAAGATTGGGAAACGAGACATCGAGTGGTGAAGGGGAAGCGTCAAAACAG
ATTTCGTCAAACAATGAGAGACGGATGACCGATTCGACTTACGTTTTGAGCGATAAAAGG
AACAAATCGAACAACTCTAACAAA

InterProScan

ProSiteProfiles
GPCR_Rhodpsn_7TM (IPR017452) - T[1-131] 11.124
PANTHER
TSHR/LHCGR/FSHR (IPR034298) - T[5-173] 8.9E-36
Pfam
GPCR_Rhodpsn (IPR000276) - T[13-131] 6.9E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value