- Transcript 'KH2012:KH.C1.1014.v1...' >
- Molecular Tool 'pFOG>Nodal' >
- Transcript 'Boleac.CG.SB_v3.S333...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S333.g07909.01.t
Possible name(s)
ACTB; ACTG1; ACTG2
Gene model
Location
S333 [47,219 / 49,846]
Amino acid sequence
Length: 376
>Boleac.CG.SB_v3.S333.g07909.01.p
MCDDETAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDXMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRXKM
TQIMFETFNCPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKS
YELPDGQVITVGNERFRCPEXLFXPSFLGMESAGIHETTYNSXMKCDVDIRKDLYANTVL
SGGSTMFPGIADRMQKEITNLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
Nucleotide sequence
Length: 1,613
>Boleac.CG.SB_v3.S333.g07909.01.t
TTCAGAATCATAAGCTTTTCTGTAGTTATATTCTAACTAATCTATAAAACATCAAAATGT
GTGACGACGAAACCGCTGCATTGGTTGTTGATAATGGATCCGGTATGTGCAAAGCCGGTT
TTGCCGGAGATGACGCTCCAAGAGCCGTCTTTCCATCCATCGTCGGAAGACCAAGACATC
AGGGTGTCATGGTCGGTATGGGACAAAAAGACTCGTACGTCGGCGATGAGGCACAAAGCA
AGAGAGGTATCCTTACCCTGAAATACCCGATCGAACACGGTATCGTCACCAACTGGGACG
ANATGGAAAAGATCTGGCATCACACCTTCTACAATGAACTCCGTGTCGCCCCAGAAGAAC
ACCCAGTCCTGCTCACCGAAGCTCCACTCAACCCCAAGGCTAACCGTGANAAGATGACNC
AAATTATGTTCGAAACCTTCAACTGCCCCGCCATGTACGTCGCCATCCAGGCCGTCCTCT
CGCTCTACGCTTCAGGACGTACCACCGGTATCGTGTTCGACAGCGGTGACGGTGTCTCCC
ACACTGTACCNATCTACGAAGGTTACGCCCTCCCTCACGCCATCTTGCGTTTGGATTTGG
CNGGACGTGACTTGACCGACTACTTGATGAAGATCTTGACAGAGAGAGGATACTCCTTCA
CNACNACAGCCGAAAGAGAAATCGTTCGTGACATCAAAGAGAAGCTTTGTTACGTCGCTT
TGGACTTCGAACAAGAAATGCAGACTGCCGCTTCAAGCAGCAGCCTTGAGAAGTCGTACG
AACTTCCTGACGGACAGGTCATCACCGTCGGCAATGAACGTTTCCGATGCCCAGAANCNC
TNTTCCANCCATCCTTCTTGGGTATGGAATCGGCCGGTATCCACGAAACCACNTACAACT
CAATNATGAAGTGTGACGTCGACATCCGTAAAGACTTGTACGCCAACACCGTCTTGTCCG
GAGGCTCAACGATGTTCCCAGGAATCGCCGACCGTATGCAGAAAGAAATCACCAACCTTG
CCCCTCCCACCATGAAGATCAAGATCATTGCCCCACCAGAGAGGAAATACTCTGTCTGGA
TCGGAGGTTCCATTCTCGCTTCCCTCTCCACCTTCCAACAGATGTGGATTTCCAAGCAAG
AATATGACGAATCTGGCCCGTCCATCGTCCACAGAAAATGCTTCTAAAAGAACCCAACTT
TCATTACAAATACCCAACTGTAGACCGGATATGACGTAAATGAAGTGAGCGCCCACAAAT
CCGCCCAACCGCACCAAAAACTACGCCCGTTTCTACGTTGGATTCGCGTTTCCTTAAAAT
TGTATTAACTATCGAATCCGGTGATATAGAATTAATAAACTGTATCTAATACCTATTGTG
ACGTGTTAGCTTGTCATAGTTATTCATTATGCAATGCATTATGGGAAATAATTATTGAAA
ATAAAAATTGACTTGTAACTGGAGGATGCACTACAATGTGGCACTTATGACATAACAATC
GGTTGGTAGGAAAACGTGTCTGTCCTTTTGTACGTCGGTCCGTTTTTTACCTCTGTTCAT
TTTAATTGGAAACTGAAATGCTGGAAAGAATAAAAAACATGTAGATTCGGAAA
| PANTHER |
Actin (IPR004000) - T[2-375] 3.9E-266 |
| Pfam |
Actin (IPR004000) - T[4-376] 2.7E-149 |
| SMART |
Actin (IPR004000) - T[6-376] 3.9E-237 |
| PRINTS |
Actin (IPR004000) - T[27-36] 1.2E-55 - T[50-61] 1.2E-55 - T[62-84] 1.2E-55 - T[116-129] 1.2E-55 - T[141-160] 1.2E-55 - T[237-253] 1.2E-55 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[54-64] . - T[357-365] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[105-117] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 94.652 % | 745 | 0 |
| ACTB_HUMAN | 95.187 % | 747 | 0 |
| ACTH_HUMAN | 91.755 % | 734 | 0 |