- Transcript 'Boleac.CG.SB_v3.S332...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S332.g07896.01.t
Possible name(s)
LOXL2; LOXL3; LOXL4
Gene model
Location
S332 [43,516 / 47,881]
Amino acid sequence
Length: 407
>Boleac.CG.SB_v3.S332.g07896.01.p
MAKVGVVYVYTVNGSHKRCVLWYGASVHLESNRSAAPGGENENAYPPRGPIWVRNVTCSG
QEKQLSDCAYEELSSDRKEWYENVDETKFCSYARQAAVWCKSAPQPKTRSVHLGGQQVSA
GASGRRSRLVKVFHNSKWRSICADTWTSKEAIVACRQANLGFATLIEKAYRTVTLIIQIH
LDAPDINVNITFLQHSIKIVRKLEKDMVCAKEEECISSSGYNKSDEELSKSHFTRKLLAF
TSLVQNFGNADFLPPKVVGGWYYHTCHKHYHSMDDFATYELRDGNSKLIEVGHKVSFCLR
DNICVNQRRKKYTCSIDYKIMYQGISVGCGDLYSNKLDCQWIDVTDVPDGVYYLEIHSNP
HLLVAEQDYTNNFVRCKVTIDGFYAFGESCHWPYDFDEVLHRDGFLI
Nucleotide sequence
Length: 1,224
>Boleac.CG.SB_v3.S332.g07896.01.t
ATGGCGAAGGTAGGAGTTGTATATGTATACACTGTAAATGGCTCCCATAAACGATGTGTT
TTATGGTATGGAGCATCGGTTCATTTGGAGTCAAATAGATCAGCTGCACCCGGCGGGGAG
AATGAGAATGCCTACCCACCAAGAGGTCCCATCTGGGTTCGGAATGTAACCTGTTCTGGA
CAAGAAAAACAGCTTTCAGATTGTGCGTATGAAGAACTGAGTTCCGATAGAAAGGAGTGG
TATGAAAATGTCGACGAGACAAAGTTTTGCTCATACGCGCGTCAAGCTGCTGTCTGGTGC
AAATCGGCTCCCCAACCGAAAACGCGTTCAGTTCATCTCGGAGGTCAACAAGTTTCGGCT
GGTGCATCGGGTCGCAGAAGTCGACTAGTGAAAGTTTTCCACAATTCCAAATGGCGATCG
ATTTGTGCAGACACTTGGACGAGCAAAGAGGCAATTGTAGCTTGTCGTCAAGCTAACCTT
GGATTTGCTACTTTAATTGAGAAGGCCTATAGGACGGTTACACTGATTATTCAAATCCAT
TTAGATGCTCCTGATATTAATGTCAATATTACGTTTTTACAACATTCAATAAAAATCGTC
CGGAAACTTGAGAAAGATATGGTGTGTGCAAAAGAAGAAGAATGTATTTCATCATCGGGT
TACAATAAATCAGACGAGGAGCTCTCCAAGAGTCATTTTACTCGAAAACTTCTTGCCTTT
ACGTCATTGGTTCAGAATTTTGGAAATGCAGACTTTCTGCCTCCAAAGGTGGTGGGCGGT
TGGTATTATCACACATGTCACAAGCATTACCACAGTATGGACGATTTTGCCACTTACGAA
TTACGTGATGGTAACAGCAAGTTGATTGAAGTTGGCCACAAAGTCAGTTTTTGCTTGCGT
GACAATATTTGCGTTAATCAAAGGAGGAAGAAATATACCTGTAGCATCGACTACAAGATT
ATGTATCAAGGAATATCCGTTGGATGTGGCGATTTATACAGTAACAAGTTGGATTGTCAG
TGGATTGACGTAACAGACGTCCCAGACGGCGTGTATTATTTGGAAATCCACTCCAATCCT
CATCTTCTGGTAGCTGAGCAAGATTACACCAACAACTTTGTTCGTTGCAAAGTCACTATT
GATGGTTTTTACGCATTCGGAGAGAGTTGCCACTGGCCTTACGATTTCGACGAGGTTTTG
CACAGAGATGGATTCCTTATTTGA
| Gene3D |
SRCR-like_dom_sf (IPR036772) - T[21-107] 2.0E-6 - T[116-221] 1.2E-8 |
| SUPERFAMILY |
SRCR-like_dom_sf (IPR036772) - T[46-102] 6.54E-5 - T[124-182] 1.09E-9 |
| ProSiteProfiles |
SRCR (IPR001190) - T[49-101] 8.751 - T[116-161] 11.073 |
| SMART |
SRCR-like_dom (IPR017448) - T[116-210] 0.0034 |
| Pfam |
SRCR (IPR001190) - T[129-167] 2.8E-6 |
| Pfam |
Lysyl_oxidase (IPR001695) - T[184-391] 2.2E-63 |
| PRINTS |
Lysyl_oxidase (IPR001695) - T[193-217] 5.2E-21 - T[265-285] 5.2E-21 - T[339-358] 5.2E-21 - T[359-376] 5.2E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LOXL2_HUMAN | 29.592 % | 188 | 4.18E-53 |
| LOXL3_HUMAN | 31.646 % | 186 | 1.97E-52 |
| LOXL4_HUMAN | 31.25 % | 191 | 2.9E-54 |