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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S6...' > 
  2. Transcript 'Haaura.CG.MTP2014.S6...' > 
  3. Transcript 'Boschl.CG.Botznik201...' > 
  4. Transcript 'Boleac.CG.SB_v3.S329...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S329.g07799.01.t

Possible name(s)

SAMD8; SGMS1; SGMS2

Gene model

Boleac.CG.SB_v3.S329.g07799

Location

S329 [142,051 / 146,718]

Sequences

Amino acid sequence

Length: 407

>Boleac.CG.SB_v3.S329.g07799.01.p
MDLSVDVTSWTVADVGQWLKSVGFGKFDELICTEHEIDGKALLALTEDDLRLPPLQLKRL
GDIKKLNLYLQELHSKQDRSRSHVSRVNGLLVPPSPTRTRRSHHRGNGNAKLIQSRYTDE
SCMSDSTDFDCVDTPAKRVRVFNPEYKKMLISFLYSIFAAFATSYTMVLVHDRVPDKNRH
PPLPDIFLDNIPLIPYAFKLTEYCGVTLMAVWVFILVFHKHSIISSVFLLRCVTMFVTSL
SVPGDHLQCQSARYVTMEARLRRAFEIFSGGGMSLTGLKTCGDYMFSGHTIVLTLLNHLI
TEYTPSRWYYLHIVSWMLNLFGIFFVLAAHEHYSIDVVIAFYITSRVFLYYHMLANTRSY
RHSKRIKIWFPLFCYFECNVPGKVPNEYEWPFSLQSIKNCFKRPKTS

Nucleotide sequence

Length: 2,501

>Boleac.CG.SB_v3.S329.g07799.01.t
GTTGACTTTTCGTTAAAGAAATCGGGCTGTACGGTACCTGTAACCTAAATGCAAAATCTG
TGCCAGCCATTTTACAGTGATAACTTCTTCATACCAACTCAACAGGGCTGTTATAAATTA
TATTTGATGAGAATTGAGAAGGGAAACGACATAAGCACTGCAATACAACCAATTGCATGG
ATTTATCCGTGGACGTGACAAGCTGGACAGTAGCGGATGTTGGACAGTGGTTGAAAAGTG
TTGGTTTTGGAAAGTTTGATGAATTGATCTGTACTGAGCATGAAATTGACGGGAAAGCGC
TTCTTGCCCTCACAGAAGATGATCTTAGATTACCACCATTGCAGCTAAAGAGACTNGGAG
ATATAAAGAAATTGAACTTGTACCTTCAAGAACTTCATTCAAAGCAAGATCGTTCAAGAT
CTCATGTTTCACGTGTCAATGGGTTGCTAGTGCCTCCATCGCCTACTCGAACACGAAGAT
CCCATCACCGCGGCAACGGAAATGCTAAGCTTATCCAATCACGATACACTGACGAGTCAT
GCATGAGTGACTCTACCGATTTTGATTGCGTAGATACACCTGCAAAACGTGTTCGGGTTT
TTAATCCAGAGTATAAGAAAATGCTGATCAGCTTCCTGTATTCTATATTTGCTGCTTTTG
CGACATCTTACACAATGGTTCTTGTTCACGATCGAGTTCCCGATAAAAATCGTCATCCAC
CGCTGCCTGATATATTTCTCGATAATATTCCTCTGATTCCGTATGCCTTCAAGCTCACAG
AATATTGTGGAGTGACTCTCATGGCAGTATGGGTCTTCATTCTGGTCTTTCATAAGCACA
GTATTATCAGCTCTGTGTTCCTATTGAGGTGTGTGACCATGTTTGTGACATCACTATCAG
TGCCTGGAGATCATTTGCAATGTCAATCCGCAAGATACGTTACCATGGAAGCCAGATTAA
GACGAGCGTTTGAAATATTTTCTGGAGGTGGGATGTCGCTGACGGGTTTGAAAACGTGTG
GAGATTACATGTTCAGTGGGCACACCATCGTTCTGACACTTCTCAATCATCTGATTACGG
AATACACGCCTTCACGTTGGTACTACCTCCATATTGTGTCTTGGATGCTCAACCTGTTCG
GAATTTTCTTCGTACTTGCTGCTCACGAGCATTACTCCATTGATGTTGTAATCGCTTTCT
ACATCACGTCAAGGGTTTTTCTCTACTATCACATGCTGGCAAACACGAGGAGTTATCGAC
ACAGTAAACGGATAAAGATTTGGTTTCCCTTGTTCTGCTATTTCGAATGCAACGTGCCTG
GAAAAGTACCCAATGAATACGAGTGGCCTTTCTCTTTACAAAGTATCAAAAACTGTTTCA
AACGCCCGAAAACCAGTTAACTATCTTGAATATCTTATGCATATGCAACACTGTGATGCA
GTGCTAAAAATGAGCAAAGGATTTTAAAAGTGAACTTCCTAATGAGCGATGATGGAAGCT
TGAAGGAGCCTTCAAGATTTCCAATTCAATTTTAGGGCTGTACTCTAGCTGATCTTACAT
TTGTATTATTCTGCAGCACTGGACATAACTTTGCAACTAACAAACATTTGGCAATATTTT
TTTGATCAACCTTTTCAATGGTGACATCACCACGTATGTGATTAGTGTCATTGGTTACAT
AATGTTGGTGGGGCGGGTGTCATGCATTTGTCCCAACTGCAATTTTAGGAATCATTAGAA
CATACTCTATTTGGTTAGATATCAAAATTCAACATACCAAGGCCCGAAGGCAGACAACTA
AAAAAACTTGTCCATTATTATCACCATTATGCCTCTTTTGTAACAAGGGTGATTTGCCGT
TATTTGGCACCTGCGGCACGTGCCCTTTACGCTCAATGTCAACTCTCTTTGAAAGGGATA
CTCTAGCAATATACCTACTGTACCTTAATAACGGCTGTGTAACGTACTGTACCTTCATTA
ACTAGTGACTGCACTTGATGGTCATTATTACACTGTTTCTACCCGACTCTTGTTGCCTTC
ACGTGTCCCCACTGTCCAATGGACGAAGTCCATCATGTACCAATAAAGTAAAATGCGTAT
TAGCCTCATGTTCAATATAACACACCTGAAGGGAGTTGGTCTTGAAGCATGCAAGCCAGG
GGAGATACTGTTACTGTAACAAGCAATGTAGACGGGTGTGCCCTCGAATAGAATGGCCCA
AAGATACACCGGAGTAGTCTTGTATAACGTGTAATTTGGGCTACCAAAGCACCCCTACGT
GCGTCGCCTAGAACCTATAAAAGCATTTCCAGAGTCCTATTTCAACCAATCAATCCTATC
TGGCCATGCCATGCAATCTTTACATTAGATGGCTAAAAGCCACCTACGATCACAGTTGGC
AGTTGCAGTCTGCACGAACCAAGATGGATTCGTTAAGAGTGTTCGTGCCCCACAAACCAG
ACGCTACCACATAGATATCTTACACACACTGCATGTATTTC

InterProScan

SUPERFAMILY
SAM/pointed_sf (IPR013761) - T[3-77] 1.16E-15
SMART
SAM (IPR001660) - T[7-76] 1.6E-5
Pfam
SAM (IPR001660) - T[9-73] 1.0E-12
ProSiteProfiles
SAM (IPR001660) - T[10-76] 13.542
Pfam
Sphingomyelin_synth-like_dom (IPR025749) - T[280-353] 8.8E-25

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMS1_HUMAN 33.252 % 234 2.08E-73
SMS2_HUMAN 36.637 % 233 2.57E-73
SAMD8_HUMAN 50.617 % 400 4.13E-138