- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Boleac.CG.SB_v3.S328...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S328.g07785.01.t
Possible name(s)
FOXC1; FOXC2; FOXL1
Gene model
Location
S328 [106,559 / 115,578]
Amino acid sequence
Length: 167
>Boleac.CG.SB_v3.S328.g07785.01.p
MQVRYPSTSHHTASHRSALPQMTPPVPPNMYPGTDHPYYSQYQAGAYQSIDVAGMHHHRH
DHYVTHASHSPYPSYGQAAHHHXQPPHHHHPHQNKDMVKPPYSYIALIAMAINDATDKKV
TLNGIYQWIMERFPFYRENKQGWQNSIRHNLSLNECFVKIPRYVIIQ
Nucleotide sequence
Length: 504
>Boleac.CG.SB_v3.S328.g07785.01.t
ATGCAAGTACGTTATCCATCTACCTCACATCATACTGCTTCGCATAGATCAGCTCTGCCG
CAAATGACGCCACCTGTTCCGCCGAACATGTATCCTGGAACCGATCACCCATATTACTCT
CAATACCAAGCTGGAGCTTACCAATCTATTGACGTTGCAGGTATGCACCATCATCGACAT
GATCACTACGTAACGCACGCGTCACATTCTCCATACCCGTCTTACGGACAGGCAGCGCAT
CATCACCANCAGCCACCACACCACCATCACCCGCATCAAAATAAGGACATGGTAAAGCCT
CCGTATTCATATATTGCGCTCATAGCGATGGCAATCAACGATGCAACAGACAAAAAGGTT
ACTCTCAACGGAATTTATCAGTGGATCATGGAGCGTTTCCCCTTCTACAGAGAGAACAAA
CAAGGTTGGCAAAATTCCATCCGACATAATCTGTCACTAAACGAATGTTTCGTCAAGATA
CCAAGGTATGTAATAATTCAGTAG
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[87-164] 6.1E-35 |
| SMART |
Fork_head_dom (IPR001766) - T[97-167] 4.4E-40 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[98-162] 8.62E-31 |
| PRINTS |
Fork_head_dom (IPR001766) - T[99-112] 7.1E-25 - T[120-137] 7.1E-25 - T[143-160] 7.1E-25 |
| Pfam |
Fork_head_dom (IPR001766) - T[99-162] 3.3E-32 |
| CDD |
Fork_head_dom (IPR001766) - T[99-162] 7.00911E-43 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[99-162] 29.976 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[99-112] . |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[143-149] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXC2_HUMAN | 80.769 % | 143 | 4.78E-41 |
| FOXC1_HUMAN | 85.714 % | 136 | 2.54E-38 |
| FOXL1_HUMAN | 81.25 % | 121 | 7.9E-34 |