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  1. Transcript 'Boleac.CG.SB_v3.S326...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S326.g07744.01.t

Possible name(s)

LIN54; TESMIN

Gene model

Boleac.CG.SB_v3.S326.g07744

Location

S326 [74,005 / 86,239]

Sequences

Amino acid sequence

Length: 685

>Boleac.CG.SB_v3.S326.g07744.01.p
MEGLNTQPDLHDLLHVEDDVVSPTSMDLSPERPLNSLNNSASKINTPAKLLMVGEPILVK
TDQSESTSTSKELSGNGDGKIDTSGSSAEELNDRINTPSPDTAAAMESFIAEDDLTAASP
KLDVSAKPPTPVSFTTSAPSKVLVAPQTSIMNTVKLQQPISIAAKKIMVATHPVQVVRKD
GGGPVFTKFVVKRSTTANAAVQKSPVVFTKTKGLHASPRKMNNFKSGGSIVLSPIKGGFK
IPISPIKSPIKVSVIPPTNTGKKIPALGKQIRIPIQTSLPPQQKVQITINANPTQVNNNQ
RQVVQQLNVISNATSIQDNQNMKNLFLQLQFPQNDTLQPGASLRSNQGHPITFTSMAQLN
GGNLSLNQSGNTIAFMSPSLSKIQPQQSSVIQRKTQTVKVAIPNQTTQQVKTQRLIMPAT
SLNTSRSIISASTPSVAGNIGYAMVPAKYVEQLQKRIITQTTFAAETSPVYCECFANGQF
CDDCNCVNCFNNLEHEVERSKAVKQCLERNPAAFRPKIGRGKDDNRTHAKGCNCKRSGCL
KNYCECYEARIPCTSKCKCIGCKNYEETNDRRSLMSLADAADFRVQQQTAAKTKLSNQIG
EMRTTTRTSQTGERLPYTFFTQEVIEATCTCLXAQAEEAEKTNRPMVVAEAMILEEFGRC
VMQIIQSAGKAKAYYCIDLFDSCCS

Nucleotide sequence

Length: 2,124

>Boleac.CG.SB_v3.S326.g07744.01.t
TTCTGTCTCAATACAGGGTTTAGGTATATAGTCTTCCATAGGCCATAGCTTCATAGTGAA
AGCATCATGGAAGGTTTGAACACACAACCAGATCTTCATGACTTGCTTCATGTTGAAGAT
GATGTTGTGTCGCCAACTTCAATGGATCTATCTCCAGAACGACCACTAAACTCACTAAAT
AACAGTGCATCAAAAATCAACACACCCGCAAAATTGCTTATGGTCGGAGAGCCAATCCTT
GTTAAAACTGATCAAAGTGAAAGTACCAGTACCTCAAAAGAATTATCAGGTAATGGTGAT
GGAAAGATTGATACTTCTGGCAGCAGTGCAGAAGAGTTGAATGACCGTATCAACACTCCC
TCGCCGGACACTGCTGCAGCGATGGAAAGCTTTATCGCTGAAGATGATCTTACTGCGGCC
TCACCAAAACTGGATGTATCTGCCAAGCCGCCTACCCCGGTTAGCTTCACTACTAGTGCT
CCAAGCAAAGTGCTTGTAGCGCCGCAAACGAGTATAATGAACACTGTTAAACTGCAGCAG
CCTATCAGTATAGCTGCAAAGAAGATTATGGTAGCCACACATCCTGTGCAGGTTGTCAGA
AAAGATGGAGGCGGACCAGTGTTCACCAAATTTGTGGTGAAAAGGTCGACAACAGCAAAC
GCAGCTGTGCAGAAATCACCGGTCGTGTTCACAAAAACAAAAGGATTGCATGCATCACCG
AGGAAAATGAATAATTTTAAATCAGGTGGAAGCATAGTGTTGTCGCCAATTAAAGGTGGC
TTTAAGATACCGATCTCTCCGATCAAAAGTCCAATTAAAGTTTCTGTAATACCACCTACG
AACACCGGCAAGAAAATCCCTGCTCTTGGAAAACAAATAAGGATACCTATACAGACTTCA
CTGCCACCGCAACAAAAAGTACAGATCACGATCAACGCAAATCCGACTCAAGTGAATAAT
AACCAAAGACAGGTTGTACAACAACTAAACGTTATATCGAACGCTACGAGTATACAGGAC
AATCAGAACATGAAAAATCTATTTCTTCAACTTCAGTTTCCTCAAAACGACACTTTGCAA
CCTGGTGCTTCTCTAAGGTCTAATCAAGGGCATCCGATAACTTTTACTTCAATGGCGCAA
TTGAACGGAGGGAATCTGTCTTTGAATCAATCGGGTAACACGATCGCGTTCATGTCGCCA
TCATTATCGAAAATCCAACCTCAACAGTCTTCAGTTATTCAAAGGAAGACACAAACTGTG
AAAGTCGCGATTCCTAACCAAACTACACAGCAGGTAAAAACTCAACGACTTATAATGCCT
GCAACGAGTTTGAATACAAGTAGGAGTATCATATCAGCAAGCACACCGAGCGTTGCAGGA
AATATTGGTTATGCAATGGTGCCTGCCAAATATGTGGAGCAACTTCAAAAGCGTATCATT
ACTCAAACTACTTTTGCTGCCGAAACGTCGCCTGTATATTGTGAATGTTTTGCAAACGGA
CAATTCTGCGACGACTGTAATTGTGTTAACTGTTTTAATAACCTCGAACACGAGGTGGAA
CGTTCAAAAGCAGTCAAACAGTGCCTTGAAAGAAATCCTGCTGCATTCAGGCCAAAGATA
GGGCGAGGGAAAGATGATAATCGAACGCATGCAAAAGGCTGTAATTGCAAGAGGTCTGGT
TGTTTGAAGAATTACTGTGAATGTTATGAAGCGCGTATACCGTGTACGTCAAAATGCAAG
TGCATCGGGTGTAAGAACTATGAGGAAACAAACGATAGGAGATCGTTAATGAGTTTAGCG
GATGCAGCAGATTTTCGTGTTCAACAACAAACTGCTGCCAAGACAAAACTTTCAAATCAG
ATCGGCGAAATGCGCACAACGACAAGGACGTCTCAAACAGGAGAAAGACTGCCTTATACT
TTCTTCACGCAAGAAGTCATTGAAGCTACGTGCACATGTTTANTAGCTCAGGCTGAAGAA
GCCGAGAAAACGAACAGGCCAATGGTCGTCGCGGAAGCTATGATATTAGAGGAATTTGGT
AGATGTGTTATGCAGATAATACAGTCTGCTGGTAAAGCTAAAGCCTATTACTGTATTGAC
CTTTTTGATAGCTGTTGTAGCTAA

InterProScan

PANTHER
Lin-54_fam (IPR028307) - T[127-456] 5.5E-88 - T[470-673] 5.5E-88
ProSiteProfiles
CRC (IPR005172) - T[459-567] 29.82
SMART
Tesmin/TSO1-like_CXC (IPR033467) - T[471-495] 0.0024 - T[527-568] 4.1E-18
Pfam
CRC (IPR005172) - T[471-492] 4.3E-5 - T[530-565] 2.9E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LIN54_HUMAN 49.326 % 308 1.62E-94
MTL5_HUMAN 52.683 % 198 5.51E-56