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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L99.5.v1.A...'
  2. Transcript 'Boleac.CG.SB_v3.S22....'
  3. EST 'AHC0AAA223YC21_RM1'
  4. Transcript 'Boleac.CG.SB_v3.S326...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S326.g07737.01.t

Possible name(s)

SALL4; ZNF236; ZNF384

Location

S326 [15,584 / 16,980]

Sequences

Amino acid sequence

Length: 330

>Boleac.CG.SB_v3.S326.g07737.01.p
QIQQTQQVSIAPQQVVLIQPYHVCKFCNKQLDTRCDPTPILREELANGSVNTSQMHSTSF
QLQTPINPTIITGVTGVPTMLALPHNITIPIQAQATQRPGNTQQIITGTNPTHIITQQQQ
VQAQPQQIQHQVQVQLQPQNLQAQQVVAQVIAQPQVQTQQAQITQVSNAQQRQMQQTPTT
QXQPPPRASPSSISSQQKPHGCKYCSKHFATKWYLDQHEKIHTGQAVTCNVCNKSFVTRW
HLDKHVRVHMAGNKKTKRETEHAEPGEATFSAADTIITVSXSAGNVQPNTINGASGVMVV
PLSSFNVTENRSQLPEFGLSPLAEQDQVDK

Nucleotide sequence

Length: 1,021

>Boleac.CG.SB_v3.S326.g07737.01.t
CAGATTCAACAAACTCAACAAGTTAGCATTGCCCCGCAACAAGTTGTTTTGATCCAGCCT
TATCATGTCTGTAAATTCTGCAACAAGCAATTGGACACAAGGTGTGACCCGACACCGATA
CTAAGGGAGGAGTTGGCAAATGGCTCTGTCAATACAAGCCAAATGCACAGTACTTCATTT
CAACTACAAACTCCCATCAATCCGACTATTATTACAGGAGTTACAGGAGTGCCAACAATG
CTTGCTTTACCACATAATATCACAATTCCTATCCAAGCACAGGCCACACAAAGACCAGGC
AACACTCAACAAATCATCACCGGTACTAATCCAACTCATATTATCACCCAACAGCAGCAA
GTTCAAGCCCAACCTCAACAAATTCAACACCAAGTTCAAGTACAACTTCAACCACAAAAC
TTACAAGCACAACAAGTCGTCGCTCAAGTCATAGCACAACCACAAGTGCAAACTCAACAG
GCTCAAATCACACAAGTTTCAAATGCACAGCAAAGACAAATGCAACAGACTCCAACAACC
CAAAANCAACCCCCTCCAAGGGCNTCACCATCATCAATAAGTAGTCAACAGAAACCNCAT
GGTTGTAAATACTGCAGTAAACATTTTGCGACAAAATGGTATCTTGACCAACATGAAAAA
ATCCATACAGGACAAGCAGTTACCTGCAACGTTTGTAACAAGTCTTTTGTGACTCGTTGG
CATTTAGATAAGCACGTACGTGTGCATATGGCTGGAAACAAAAAGACGAAAAGAGAAACT
GAGCATGCCGAGCCTGGGGAAGCAACATTTAGTGCTGCAGACACTATAATTACAGTAAGC
NATAGTGCTGGAAATGTTCAACCAAACACTATTAACGGGGCATCAGGAGTTATGGTCGTT
CCTCTTAGTTCATTTAATGTAACAGAAAATAGAAGCCAGCTCCCAGAATTTGGCTTGTCA
CCACTTGCAGAGCAAGATCAAGTCGACAAATAAGAATATTGCACAAGGGGTACAAGAGTG
C

InterProScan

SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[198-249] 1.63E-11
ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[200-227] 11.489 - T[227-254] 10.866
SMART
Znf_C2H2_type (IPR013087) - T[200-222] 0.22 - T[227-249] 7.6E-4
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[202-222] . - T[229-249] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value