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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R58....' > 
  2. Transcript 'KH2012:KH.S988.1.v3....' > 
  3. Molecular Tool 'Mitf>Stable b-catenin' > 
  4. Transcript 'Boleac.CG.SB_v3.S323...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S323.g07687.01.t

Possible name(s)

PKD1; PKD2; PKD2L1

Gene model

Boleac.CG.SB_v3.S323.g07687

Location

S323 [11,228 / 17,445]

Sequences

Amino acid sequence

Length: 1,131

>Boleac.CG.SB_v3.S323.g07687.01.p
LKTTKAPMDGRIAPMLQEVVSCIIKMRCENQRNSLQHHLLSHQKVPIISNRKLERKQTGF
VKKSTGSASPPNFIADEDDDSDDLWDILNDDDMGDNLVITNKQAMLKRTRRTKFSETDEI
VLTDEQQGLVDNDILTDSGDDDTDSDVPLPEFPSSRGQSRMSRASTHFGTSPQPSSEACL
LPHCCIYFTYLLCFSAMAVCIFFIILYGNDFGPDTTKRWLLSLLVSLLESFFLVEPIKVV
FFAVFIAMISKPINPEENDNLVDKPYVDPYGHTDSFSKVRAPGGFALDKCKREAQKTQRS
NKMLLNLAVYLIFLSCVAAVASWDRDPMGYHNTITIKDSLFNTNFNLSSDAEGSKWQNDT
KVFKDISTITDIWEWLNQVLTVKILEEKSSLDNENVNNNLLGKIRLRQQRGVNGDCMIDS
AGIYYNQLSYAGKRCLTNDAGNQDRATYDLNWVLNPNGAWSHTNGDIAGILYWGQEHMYD
DSGYSQFIDSTTSVGEAQGNLTXLQEGNWLNRDTRVLFVEFTQLNEATYWFTVCVVMFEI
GVSGAVQPSHSIQTVRVFVPSAAFYIDMLFMGFIGLXGLYLLLHELKKTRDPNMSVDKYF
SKWTNWLNLLVLLFTLALSVLYVYKQIYMDEIAKRYISDKTAFTNFFKFAFFTDLVTIFA
CLLLFLLILRATRVFRFFKSWSAFGDTIAASAGYLAGATVILVAVILGFAALGFLVYGQS
YTXIIPDFCDFPNAIYTMFRVFRGRFDVRICFXYSPFFTILFFFSYYLCVFYIFCKLFAA
ILINEYKFSRGRKSHLRLEILDYEILDHLIARXKLRLGIXKPKEYRPTVRFEGMSTPSSR
GSFMSLDSFDTFSFXPGRISQCSYATGISSSSSDSGFGTPSDHSISVYDYLTLDQPSDTP
MDTQHLDYLYGRLSNYSVDMMLHRFERVSVLTDEVSVLESNAVKLSIIKKQQALLQSQSK
EIATAASSVTVQPNYIPELDRQRSQGSATTYSSRGHFSLHSQSTPPQTTGKSGRKSAASS
DALFETVMHSMFPVKHSWVSDLSNPKLSSTKRESSRKSSVASQSRSEADSLKRTPARQNS
FTGLSHAESESGKREIARHNSFTSQSRGDSDVMKRVLARQNSFSNQKIHPR

Nucleotide sequence

Length: 3,393

>Boleac.CG.SB_v3.S323.g07687.01.t
TTGAAGACAACGAAAGCTCCGATGGATGGCCGAATCGCACCAATGCTACAAGAAGTGGTG
TCCTGCATTATCAAAATGAGGTGCGAAAATCAAAGAAATTCTCTTCAACATCATTTGTTG
AGTCACCAAAAAGTGCCAATCATTTCCAACAGAAAACTCGAACGAAAACAAACCGGATTT
GTCAAAAAGAGTACTGGTAGCGCGAGCCCTCCAAATTTCATTGCTGATGAAGATGACGAT
TCCGACGATCTCTGGGATATCCTGAATGATGATGATATGGGAGACAACCTTGTCATAACA
AATAAACAAGCCATGCTGAAGAGGACCAGAAGAACAAAGTTTTCTGAGACTGATGAAATT
GTGCTTACTGACGAGCAACAAGGGCTCGTCGATAACGATATTCTAACCGACAGTGGTGAT
GATGATACTGATAGCGATGTGCCGTTGCCAGAATTTCCTTCTAGTAGAGGACAAAGTAGA
ATGTCAAGGGCTTCCACGCACTTTGGGACGAGTCCTCAGCCTTCATCTGAAGCATGCTTG
TTGCCGCACTGCTGCATTTATTTCACATATCTTCTCTGTTTTTCTGCCATGGCCGTGTGC
ATATTTTTCATAATCTTGTATGGAAATGATTTCGGACCAGATACAACAAAACGTTGGTTG
TTGTCATTACTTGTATCGTTGCTTGAAAGCTTTTTCTTGGTGGAGCCAATCAAAGTTGTC
TTCTTTGCTGTCTTCATTGCAATGATATCGAAGCCAATCAATCCAGAGGAAAATGACAAC
TTGGTCGACAAACCATACGTGGATCCGTATGGTCATACTGATAGCTTCAGTAAAGTACGT
GCTCCTGGTGGATTTGCTCTTGACAAATGTAAACGAGAGGCTCAGAAAACACAAAGATCT
AACAAGATGTTGCTTAATCTTGCCGTATATCTCATCTTTCTCTCCTGTGTGGCTGCAGTT
GCATCATGGGATCGAGATCCAATGGGATATCACAATACAATTACTATCAAGGATTCACTT
TTCAATACAAATTTTAACCTCTCAAGTGATGCCGAAGGTTCAAAATGGCAGAATGACACA
AAAGTATTTAAGGATATATCAACGATTACTGATATCTGGGAATGGTTGAATCAAGTGCTT
ACTGTCAAAATCCTAGAAGAGAAATCTAGTCTTGATAATGAGAATGTAAACAACAATTTA
CTTGGAAAAATCCGTCTTCGGCAACAGCGTGGAGTAAATGGTGACTGCATGATTGACTCG
GCTGGAATATATTACAATCAACTATCGTATGCCGGAAAGCGTTGCTTGACAAATGATGCT
GGCAATCAGGATAGAGCGACATATGATCTGAATTGGGTGTTGAATCCGAATGGGGCTTGG
AGTCATACCAATGGTGACATTGCTGGGATATTATATTGGGGACAAGAACATATGTATGAT
GATTCTGGATATTCCCAGTTCATTGACAGCACCACATCGGTGGGTGAAGCACAAGGGAAC
CTGACANTTTTGCAGGAAGGAAATTGGTTAAATCGTGATACAAGAGTGCTGTTTGTTGAG
TTTACACAGTTAAATGAAGCTACATACTGGTTCACTGTGTGTGTTGTCATGTTTGAAATT
GGTGTATCAGGAGCAGTACAACCTTCGCACAGTATACAGACAGTGAGGGTNTTTGTTCCC
AGTGCAGCATTCTACATCGACATGCTTTTCATGGGTTTCATTGGGTTAATNGGCCTCTAT
CTTCTCCTACATGAATTGAAAAAGACTCGAGATCCAAACATGTCAGTTGACAAATATTTT
TCAAAATGGACAAACTGGCTCAATTTGTTAGTGCTACTGTTCACTCTAGCACTCTCNGTG
CTCTATGTCTACAAGCAAATTTACATGGATGAAATTGCAAAACGATATATTTCTGATAAA
ACAGCCTTCACTAATTTCTTCAAATTTGCTTTCTTCACTGATCTTGTTACAATTTTTGCT
TGTCTTCTTTTGTTTTTGCTGATACTCAGGGCGACGAGAGTGTTTCGTTTCTTCAAATCT
TGGTCTGCATTTGGTGACACAATAGCCGCAAGTGCCGGATATCTTGCTGGTGCGACTGTA
ATCCTTGTGGCGGTTATTTTGGGCTTTGCTGCACTTGGATTTTTGGTGTATGGACAAAGC
TACACTCANATCATTCCNGATTTTTGTGACTTTCCTAATGCAATCTATACAATGTTTCGT
GTCTTCCGAGGCCGTTTTGATGTCCGAATCTGTTTCNATTATTCTCCNTTTTTTACAATC
TTGTTCTTTTTCTCTTACTACTTATGTGTTTTCTATATATTTTGCAAACTTTTTGCCGCG
ATACTCATCAACGAATATAAATTTTCTCGGGGAAGAAAAAGTCACCTGCGTTTGGAAATT
CTTGACTATGAAATACTTGATCATCTCATTGCAAGAATNAAGCTACGNCTTGGTATTATN
AAACCTAAAGAGTATCGTCCCACTGTTCGATTTGAAGGGATGTCAACGCCTTCTTCAAGA
GGATCTTTTATGTCATTGGATTCTTTCGATACTTTCAGCTTTTTNCCTGGGCGGATATCT
CAATGCTCTTATGCCACTGGAATTTCATCTTCATCGTCAGATTCAGGGTTTGGGACGCCC
TCTGATCACTCAATTTCTGTCTATGACTACCTCACTCTNGATCAGCCATCCGACACCCCA
ATGGACACACAACATCTTGACTACTTATACGGCCGCTTGTCTAATTATTCTGTTGACATG
ATGTTGCACCGTTTTGAAAGAGTCAGCGTACTTACAGATGAAGTGTCAGTGTTGGAGTCC
AATGCAGTAAAGTTGTCGATAATAAAGAAACAGCAAGCTCTCCTCCAAAGCCAATCAAAA
GAGATTGCAACAGCAGCATCCTCTGTGACTGTTCAACCAAACTATATACCAGAATTGGAC
AGGCAAAGATCTCAAGGAAGCGCAACAACTTATTCAAGTCGTGGACACTTCAGTCTCCAC
AGTCAGTCAACACCACCACAGACTACTGGGAAAAGTGGCAGGAAAAGCGCTGCCTCTTCT
GATGCTCTTTTTGAAACTGTGATGCACAGTATGTTTCCCGTAAAGCACAGTTGGGTATCT
GACTTATCAAATCCAAAACTGTCTTCGACAAAACGGGAGTCATCNAGAAAGAGTTCTGTT
GCAAGCCAATCACGCAGTGAAGCAGATTCTCTGAAGAGGACACCTGCTCGACAAAATTCG
TTCACTGGTCTAAGTCATGCTGAGTCGGAGTCTGGAAAACGAGAGATAGCACGACACAAT
TCATTCACTTCGCAATCACGTGGCGATAGTGATGTGATGAAACGTGTCCTTGCCAGACAA
AATTCATTTTCAAACCAGAAAATTCACCCACGA

InterProScan

PRINTS
PC1 (IPR000434) - T[215-232] 1.4E-8 - T[659-681] 1.4E-8 - T[695-716] 1.4E-8
Pfam
PKD1_2_channel (IPR013122) - T[363-787] 2.4E-63

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PKD1_HUMAN 25.921 % 170 1.54E-42
PK2L1_HUMAN 24.242 % 114 1.0E-25
PK1L2_HUMAN 22.895 % 147 1.53E-35