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TRANSCRIPT CARD

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  1. Transcript 'Moocul.CG.ELv1_2.S69...' > 
  2. Clone 'cima877374' > 
  3. Transcript 'KH2012:KH.C9.317.v2....' > 
  4. Transcript 'Boleac.CG.SB_v3.S321...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S321.g07658.01.t

Possible name(s)

LSM10; SNRPD1; SNRPD3

Gene model

Boleac.CG.SB_v3.S321.g07658

Location

S321 [56,463 / 57,311]

Sequences

Amino acid sequence

Length: 121

>Boleac.CG.SB_v3.S321.g07658.01.p
MKLARFLMKLSHETVTIELKNGTQVHGTITGVDICMNTHLKSVKMTVKNKEPVNLETLSI
RGNNIRYYILPDSLPLDTLLVDEGPKPRAPRGGDRGRGRGRGRGRGRGMRGRGRGSVLLP
G

Nucleotide sequence

Length: 366

>Boleac.CG.SB_v3.S321.g07658.01.t
ATGAAGCTCGCTCGATTTTTGATGAAGCTCAGCCATGAGACAGTGACTATTGAACTGAAA
AATGGTACCCAAGTCCATGGAACTATAACGGGTGTGGATATTTGCATGAATACTCACTTG
AAATCCGTCAAGATGACTGTGAAGAATAAAGAGCCTGTCAATCTTGAAACCCTAAGCATA
CGCGGAAACAATATCAGATACTACATACTTCCAGACAGCCTGCCGCTTGATACTCTACTT
GTCGACGAAGGTCCGAAGCCACGGGCGCCAAGAGGTGGTGACAGAGGTAGAGGTCGTGGA
AGGGGACGTGGACGCGGAAGGGGAATGCGTGGCCGAGGTCGAGGTTCTGTGCTCTTGCCT
GGTTAG

InterProScan

PANTHER
LSm4/Sm_D1/D3 (IPR027141) - T[1-105] 4.3E-49
CDD
Sm_D1 (IPR034102) - T[2-90] 8.39315E-59
SMART
LSM_dom_euk/arc (IPR001163) - T[5-70] 1.6E-18
SUPERFAMILY
LSM_dom_sf (IPR010920) - T[5-113] 1.04E-26
Pfam
LSM_dom_euk/arc (IPR001163) - T[5-69] 2.1E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMD1_HUMAN 83.516 % 160 1.71E-52