- Transcript 'Boleac.CG.SB_v3.S31....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S31.g07413.01.t
Possible name(s)
GPS1; PSMD6
Gene model
Location
S31 [371,463 / 375,239]
Amino acid sequence
Length: 454
>Boleac.CG.SB_v3.S31.g07413.01.p
MSRHINQVGDFCFASALHVSTVDIPVPSPLSQGLEYKNKFFVTRNKTMPIENLEEEGLKK
IPDLEVSQLRFLLTLEDDIDRNEVKKRFLKSIEEKEMAPYYEEVCKELKWKVNNALLKRL
KDANEKALKKFDEKISETEEMEYESEVRDALLAKAEYLCQIGNREECLKVFQQAYDKTIA
LGHRLDIIFYRIRLGMFCMDHQLISQNIEKAKQLIDEGGDWDRRNRLKVYEGLYCISVRD
FKKAAHLLLDTVSTFTSYELMDYKQFVQYTVYISMLALERTELREKIFVLKFLYGCNDDE
IHLQVVNGSEILEVLHSNHGCKSYLFSLYDCRYAEFFKCLANVEVEMKRDRLFNPHYRFY
TREMRILAYTQLLESYRSLTLDYMADAFGVTVEFIDRELSRFIAVGRLHCKIDKVGGIVE
TNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINI
Nucleotide sequence
Length: 2,754
>Boleac.CG.SB_v3.S31.g07413.01.t
TTTCATGAGTAGACATATAAACCAAGTTGGGGATTTTTGTTTCGCGTCTGCGCTTCACGT
CTCAACTGTAGACATACCGGTACCTTCTCCTTTGTCGCAGGGTCTTGAATATAAGAATAA
GTTCTTTGTAACCCGTAATAAAACGATGCCTATTGAAAACTTGGAAGAAGAAGGGCTCAA
GAAAATCCCTGATCTCGAAGTTTCACAGTTGAGATTCCTTTTGACGCTTGAAGATGACAT
TGATCGTAATGAAGTCAAGAAACGTTTTTTAAAATCCATTGAAGAAAAAGAGATGGCACC
GTACTATGAGGAGGTATGTAAAGAACTCAAGTGGAAAGTGAATAATGCTTTGTTGAAAAG
GCTAAAAGACGCCAATGAAAAAGCCTTGAAAAAATTTGATGAAAAAATCAGTGAGACTGA
AGAAATGGAATATGAAAGCGAGGTTCGCGATGCTTTACTGGCGAAGGCGGAATACCTTTG
TCAGATTGGAAATCGTGAAGAGTGCCTCAAAGTATTTCAACAAGCATATGACAAAACCAT
AGCTCTTGGCCACAGATTGGACATCATATTCTACAGAATTAGACTCGGAATGTTTTGTAT
GGACCATCAATTGATATCACAAAACATTGAAAAGGCAAAACAGTTGATTGATGAGGGCGG
GGATTGGGATAGAAGAAACAGACTGAAAGTATATGAGGGGCTGTACTGCATCTCAGTTCG
GGATTTTAAGAAAGCGGCTCATTTACTCCTTGACACAGTCTCGACATTTACGTCGTATGA
ATTGATGGACTACAAGCAATTTGTACAATATACTGTGTATATTAGTATGCTTGCTTTGGA
GAGAACGGAGTTGCGGGAAAAGATCTTTGTGCTAAAGTTCTTATACGGTTGTAATGACGA
TGAAATTCACCTACAGGTTGTAAATGGATCTGAAATATTGGAAGTTTTGCACAGCAATCA
CGGTTGTAAATCATATCTCTTTTCACTCTACGATTGTCGATATGCTGAGTTTTTCAAGTG
CTTGGCCAATGTTGAGGTGGAAATGAAGCGTGATCGACTATTTAACCCACATTATCGCTT
TTACACAAGGGAAATGAGAATCCTGGCATATACGCAATTGTTGGAGTCATACCGCAGTTT
GACCTTGGACTATATGGCGGATGCTTTCGGGGTGACTGTTGAATTCATAGACAGGGAACT
GTCGCGATTCATTGCTGTTGGAAGACTACATTGCAAGATTGATAAGGTGGGAGGTATTGT
TGAAACGAACCGACCTGACAGCAAAAACTGGCAATATCAAGAAACCATCAAAAAGGGTGA
TTTGCTATTGAACAGAGTTCAAAAACTTTCTAGGGTTATCAATATCTAGAATTCTACATG
ATAACAGTCCAGTCTTCTGATATTTTGATGTGTATAATGTACGTCCTATTGGGGCATGTA
TTTTGTCAGTCTTACCGTTGTCATGGCTCAAGCTGAAAAAGTTGATAAAAGATAGAGCGC
TGTTGCCTTTCAAAATAGCTTACAGGTCAATGTAATATTTCTAAACTTACTCATGGTCTA
GTCTCCCATCACTTTGAGTGGTGTAGTGAGGTAGGTAAATTGTGGAGGTTTATTGACCGG
CATTCGCACTGCTAACAGTCTAATGTTCAGGTCAATTTGTCAACCATATTATTACATGTT
ATGTCATGACTCATGACCCCAGAGAAGGTCGTGGTTAGGCCGTGTGACACTTGGTACCGG
TACATTATATGCCTATTATTGATGCCTGCGGGCTACAAGTGGCAGCATAGTAGAGGTTGC
GCTGTATAGATTATGTGTCTTTGGCCAATAGCTAGCAAATTTGAGCACCAATACATGGCT
GGTATGGCTTCATGCCTGAACCGGTCATTCAGTCATATAAGACTTGGGTAAAAATAATTT
CTCGAACTTTTTGCTCGATGCAGGGCTGTGATACCTCGAGTCGCACTGTTCCGAAAATGT
CCTGTGATCTCGCATTATAGGGAAGTGATATGTCTATCAACCGCAACATGGTGACTGGTG
AGTGACCAAAATAAGCATCTCACGTGCCTGTCACTCTGGCAAACCATGTCCGTGGTAGAG
GGACAGATGCTTAACCATTTTTGGTGAGAGGAACAATGAAATCTTCATACACTTTCTGCA
TGCCCACCATGGACAAGAAAAACTTTGACAATTCTGCATTATCTTTCAGCTCTGCGACAC
AGAATTTTACTTTGTACTGTTTATCGTAGACCTGATTGCATAGGATTGACATCATTCGTT
CCTTGCATGGCTTCCCTGCAGAGTCGATGTCTACTTTCCGACTCTTCAACCTCTTTATAA
ACTCCTCTATGGATATGTCCGATCCTCTCAAAGTTACTAAGATTATTTTCCCACAGAACA
ACACCAAAGTATCTGTTTGCAATTGTCCACTCCATTTTTTCAAGATCTTCAAATAACTGT
CCCTACATCGCATGTGGTCAATTCTCATAATGCACACGTGTGATTTTCTTGGTCTGGTGA
CTTCTGCAGTCGATTCCACTTTGGTTGAAACGTTTTCAGTCAACCATGAGATAATGCTCA
GCATCATTCCACTTTCTTCATAATTGTCAAAGTAAAATATTTTCAAATCATTGTTCAATT
TGGTCACTTCACTCCTTGTAAGAATGGGGTGGGAAATGGTAACATGCGGCGGACATGTAG
GATAGTCTTGTGGGATGCTAAGCGATAAACATATATGAGGTCTTAAATTCAGTG
| PANTHER |
PSMD6 (IPR035268) - T[53-454] 3.0E-172 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[112-260] 2.84E-5 |
| Pfam |
Rpn7/CSN1 (IPR019585) - T[114-286] 7.6E-52 |
| Pfam |
PCI_dom (IPR000717) - T[324-422] 7.7E-15 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[350-431] 6.53E-18 |
| SMART |
PCI_dom (IPR000717) - T[355-438] 2.4E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PSMD6_HUMAN | 65.111 % | 551 | 0 |