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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S31....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S31.g07407.01.t

Possible name(s)

RDH11; RDH13

Gene model

Boleac.CG.SB_v3.S31.g07407

Location

S31 [352,089 / 356,693]

Sequences

Amino acid sequence

Length: 307

>Boleac.CG.SB_v3.S31.g07407.01.p
MEKRAMSKERLNSKCVIVTGANRGIGFQAALKMAEEGARIILGCRDMKSAAEAKQLIANQ
TNNNNIAIKKLDLASFKSIEAFAKNVYETENRVDILINNAGLLANSYRETEDGLELHFGI
NYLGHFLLTNLLLDLLKRSSPSRIIHVSSIGHRYGHIHWDDFNMKESFNGLEAYSQSKLM
NILFSLELSKRLEGTGVTSNSLHPGAINTDIYRETAGCCKHGGCIGFCISLIGMCRGCMS
PASRGAETVVYCAINPEIESTSGRYFRNRKIKREATHARNEDDAERLWQCSEELTHLTKR
LSSLTCS

Nucleotide sequence

Length: 2,161

>Boleac.CG.SB_v3.S31.g07407.01.t
GTCTTATGTAGCCTACATGAATAGATCGACATATAGGCTGTTCGGTAGAATAGGCCGCTG
TATTTCGCTTGACGAATAAATTACGTAATCCAGTTTCAGAAGTATTGACGAGAAATTCGT
ATTCCATTACATGACATCTCAATATCGGTGATGGAGAAACGTGCCATGTCCAAGGAACGG
CTAAATTCCAAGTGCGTAATCGTTACGGGAGCTAATCGTGGAATCGGTTTCCAAGCTGCA
TTAAAGATGGCTGAGGAAGGTGCGAGAATAATTCTGGGATGCCGAGATATGAAAAGTGCT
GCAGAAGCTAAACAACTGATTGCGAATCAAACAAATAACAACAATATAGCGATCAAAAAA
CTTGATCTAGCATCATTCAAGTCCATTGAAGCATTTGCTAAGAATGTGTACGAGACGGAA
AACAGGGTAGACATACTTATTAACAACGCAGGCCTATTAGCAAATTCCTACAGGGAAACG
GAGGATGGGTTAGAGTTGCATTTTGGCATCAACTATCTCGGGCATTTTCTATTGACAAAT
TTATTGTTGGATCTATTGAAAAGGAGTTCCCCCAGCCGGATCATACACGTTTCTTCAATC
GGTCATCGATATGGTCATATACACTGGGACGATTTCAATATGAAAGAGAGTTTCAACGGA
TTGGAGGCATATAGTCAAAGCAAACTGATGAATATTCTCTTCTCACTGGAACTATCAAAG
AGATTGGAAGGGACCGGTGTCACATCTAATAGCTTGCATCCGGGCGCCATAAACACTGAT
ATATATCGGGAAACCGCCGGCTGCTGCAAACATGGAGGTTGCATCGGATTTTGTATTTCC
TTAATCGGTATGTGCAGGGGATGCATGTCGCCAGCAAGCAGAGGCGCTGAGACGGTGGTT
TACTGTGCGATTAATCCTGAGATAGAATCAACGTCTGGACGTTACTTCAGAAATCGAAAA
ATAAAACGGGAGGCGACGCACGCACGAAATGAAGACGATGCGGAACGGCTATGGCAATGC
AGTGAGGAGCTTACACATTTGACCAAAAGACTTTCATCACTGACCTGCTCGTAAACCAAA
ATGGAAGTTTGGCTCGGAGGGAAACCGTCACCGTGACTTATATGGCTATATCTTAAATTT
GGAGGAAGTTTCACATACATGCTAGGATACGGGTTGTCTTGACACAAAAATTCGTCATAT
CCAAGGAATCGACTTTATAAGGTTAAATGGCGATATGAGAGGAGATATTATAAATTAGAC
CATTAGTAGAAATGCATTAGTACAATTTAGTTACCANTGCATATACTAGCAAAGATGTCC
ACTATTCGATTCACAAACGAATTTCGAGTGAAAGAAATATATTTATCAAGGTAATCCGAC
TGAAAGGTAATATGTGATAGAAAAACCGATGTTTGATAATGCATTTTATTCACTAAAGGT
ATGCAACATGAGAAAACATTAAGAATGGGACGGGTCCAGTAACGTCGCTAAGAATGGATC
CTGATCATCATCGCAGTATATACCCGAACGTTGCTACGAAAGTTCAACGTTTATAGGACA
ATTAAAATCAAACCGATGGTCCCTTCGAGAGGGCATGTCTTAACTTTCTGGTGAACGATG
GCATTCGCAGGGCTACTTGATATATAATCGATAAGAAGCAATGACATTGGCAGTAAAAAG
GATAGGTTTCATATCGACGTCGTCTTGAGCTACAAACGCACATATTCACGAAGTCACACG
GTCGCTTATTTGCTCAAGTGGAGGAATTTTGCATCAGAAGGGCTTTCGGCGCCAAATTAG
CAGTCATGGCAAAACCTCGTTGTTCGCTATGAATTCGCGGACCTCTATGGAACACACAAC
CAAAAACGAATGAATCGAGACAAAGAAAATATCTCTAGACGAATATTTCGCTGAAGGTTG
CAAAGATTTTCTCAACTATTTTCTTGTCAAAATCAAGTATTTGTTGTTCGATTTCGTTAT
CGAGTTGCTCTTCGCCCAGAATCCTAGTGAGATTTTGCGCTATATCATTACTCCGATGCC
GATTCTCAGAATAGTCTGTGTTTGTCAGGATGTTCAGCAGCAAATCAAGATATTCCGTGC
GTAGCTAAAAATTTCATCAACATTCCAAAAGTTGTGCCAGGAAGATTGACATACAGCTGG
G

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[11-268] 1.19E-55
Pfam
SDR_fam (IPR002347) - T[14-214] 1.1E-30
PRINTS
SDR_fam (IPR002347) - T[15-32] 5.2E-16 - T[91-102] 5.2E-16 - T[91-102] 2.0E-5 - T[136-152] 5.2E-16 - T[142-150] 2.0E-5 - T[174-193] 2.0E-5 - T[195-212] 5.2E-16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH11_HUMAN 40.625 % 213 1.21E-67
RDH13_HUMAN 47.099 % 227 6.23E-73
RDH12_HUMAN 41.053 % 210 2.08E-66