- Transcript 'Moocul.CG.ELv1_2.S52...' >
- Transcript 'Moocci.CG.ELv1_2.S52...' >
- Transcript 'Haaura.CG.MTP2014.S4...' >
- Transcript 'KH2012:KH.C1.83.v1.A...' >
- Transcript 'Boleac.CG.SB_v3.S314...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S314.g07508.01.t
Possible name(s)
RAB11FIP1; RAB11FIP2; RAB11FIP5
Gene model
Location
S314 [31,422 / 40,033]
Amino acid sequence
Length: 457
>Boleac.CG.SB_v3.S314.g07508.01.p
MFSPTDVRVIVHRARNLLVKGKNTNDAYATMEFGGEKYATNVVEKSVSPSWHQECQYQLP
QGGVLHNAIVTISVYNKHHGKLGLQNDDFIGILKIXLSKFDATKTKEYRKWYSLEHKNPK
KEKKDRGEVEVGIKFISKDRPLILPDKRSPKNLRAIKDKLKMRRKSEDEDSGVGCDSNSS
SMKRGVSMADLQRTPSSASDSGSKRRLSFIEAGSAASARGLVKLSNKIGLGGNKTKATSV
EVLHNPEIKKVSSLSNLRRSGSSGSFLNVKKQHMRNRSMPDPSLLALTERNSPRNSICIN
GPHIYISGSDSGNNSPSASVENLNLLDPKPYDAEGMDQLHASHNENFSNSKPKNSPEERK
KLSPLSIVYKPKSYYRLDVKDLCKVSPIPEDPTVTFQQMSKEDLMALCVKQHNMLANKNE
QMKELEDYIDKLLLKVMVMTPQILDCSKNGAAKRTKL
Nucleotide sequence
Length: 2,548
>Boleac.CG.SB_v3.S314.g07508.01.t
TTTATATGTTTTTGTAGTATGTTTCATTAGATCTGCTACCGTATTAGTTATTGAAACACC
TTGAAATCACGGTAACAACTAACAAGGATCATGTTCAGCCCAACTGACGTCCGGGTGATA
GTTCACCGTGCAAGAAATCTGCTTGTAAAAGGCAAGAATACTAATGATGCGTATGCTACC
ATGGAGTTTGGTGGGGAAAAATACGCCACTAATGTGGTGGAAAAATCAGTTTCCCCATCA
TGGCATCAAGAATGCCAGTATCAACTGCCTCAAGGTGGTGTTCTTCACAATGCCATTGTC
ACGATATCAGTGTATAATAAGCACCATGGAAAACTCGGACTTCAGAATGATGATTTTATT
GGAATCCTAAAGATTNCTCTCAGCAAATTTGATGCTACAAAAACCAAAGAATATAGAAAA
TGGTATTCATTGGAGCACAAGAATCCAAAAAAAGAAAAGAAAGACCGTGGTGAAGTTGAA
GTTGGGATCAAGTTCATTTCTAAAGATAGGCCCTTGATTCTACCTGACAAAAGGAGCCCT
AAAAACTTGAGAGCAATCAAGGATAAGTTAAAAATGAGAAGAAAATCGGAGGATGAAGAT
TCTGGGGTCGGCTGTGATAGCAATAGTTCTTCAATGAAACGAGGTGTATCAATGGCTGAT
CTTCAGAGAACACCATCAAGCGCCAGTGATAGCGGTTCCAAAAGACGGTTATCATTTATT
GAAGCCGGATCTGCAGCTTCAGCGCGTGGATTAGTAAAGCTTTCTAATAAAATTGGGCTT
GGCGGGAACAAAACAAAGGCGACAAGTGTTGAGGTTTTGCATAATCCAGAAATCAAGAAA
GTGTCCAGCCTCTCTAATTTACGAAGATCAGGCTCTAGTGGAAGCTTTCTCAATGTCAAA
AAGCAACATATGAGGAATAGATCAATGCCAGACCCGTCGCTTCTTGCTCTAACTGAACGC
AACTCACCACGTAACTCCATCTGCATTAATGGCCCTCATATATATATTTCAGGATCTGAT
TCCGGTAACAACAGTCCGTCAGCATCAGTGGAAAATTTGAACTTGTTGGATCCTAAACCG
TATGATGCAGAGGGGATGGATCAACTGCATGCTTCTCATAACGAAAATTTTTCAAATTCA
AAACCTAAGAATTCCCCAGAAGAAAGAAAAAAGTTATCACCATTGTCAATCGTCTACAAG
CCAAAAAGTTACTACAGACTTGATGTCAAAGATTTATGCAAGGTGTCACCTATCCCAGAA
GACCCAACGGTCACATTTCAGCAAATGAGCAAAGAAGACCTGATGGCTCTATGTGTAAAG
CAGCACAACATGTTAGCTAACAAGAATGAGCAAATGAAGGAACTTGAAGATTATATCGAT
AAATTGTTACTCAAAGTCATGGTGATGACACCACAGATTTTGGACTGTTCAAAGAATGGT
GCGGCTAAAAGAACCAAATTGTAATCGTGCAATCTTATCTTCACTTCACCACGTTTTCAT
ATAATTTCATGTGCCTATCAATACCTGCTGGATTTTTCCTATTTAATGAATTTTACCCTA
CTTGTCTGCACAAGTTTTGTATTTTGTTTGTAGCCAAATGGTGAAGTCGCTTGTAGAATC
TATGATATGTCAAAGGCTATACGTACTGCATTACCTGATGTAGGTCTGCATTGTGGACTT
ATGAAGAAAGGCGATTGTGGTTTGGTTCACGCATTTTCAACCACCAGCCCGACTGAATGT
CCTCTTCTAAAAATTACACAATCATTTGGCATGATTTTTCACAAAAACCTGCCTGCCACT
CATGATTCATATTTCTCAATGCCATGGAATATGCCATTGAGAAGTTTGGTAGCACATTTG
CGAACTTGTGATGTGGAGTGTTAAGCTCTTCCTATGCTTGGTGACCAATCCAAGTTTCAA
GGTATATATATATGTATGGCCTACATGTTGAATATATTGGCTGTACGTCAAGGCTGGATT
AACACAAAGAGAAGCTGGGGTAGTATTCGTCCCACCGTACATTACGTTAGCCAATAAAAA
CAGTAGACAACTACTGTGATTCTCAATGCACGGGCCCCCTTAAATTTAGGTGACTACTTT
TTCGGCTCCACCAGTTAATCCGCCCTTGCTGTACATTGAATCTTTACTCAATGTGTACTC
GCTAAGTGTTGCTAATTCTGTATTAATATGATGGAACTGGAAAATTTCTGTGATGGTACA
TTTTACTTGGTGCGGTTGATCGATCGTTGAACGTCAGCCTTGCATTTGTTTTATGGTATT
TTCCAACAGGTTAGCAATAAACGTTGGTTATCCAACTTCAACTTTTCCATTTTACTATGT
CCTTCCACGCTGCCTATGTTGATCAACTTTCCCTTTTTGTTTTGAAATGTAAACTTTTTT
AGCAAATCAACATTTTATCTTACCATGAAGAAAATTTTTGTGATGTTAGTGGCTGCTCTA
CCAAGTTGGTTGAGGATTAAGTCACGTGGCATCGCTGTGATTATTTTTTCATTTGAAAAA
TTATTTTTCAATAAAATGCCCTCCAAGA
| ProSiteProfiles |
C2_dom (IPR000008) - T[1-94] 11.211 |
| PANTHER |
FIP_classI (IPR037789) - T[1-323] 4.0E-63 - T[348-455] 4.0E-63 |
| Gene3D |
C2_domain_sf (IPR035892) - T[5-139] 1.8E-23 |
| SMART |
C2_dom (IPR000008) - T[6-109] 3.2E-11 |
| Pfam |
C2_dom (IPR000008) - T[7-114] 6.3E-16 |
| ProSiteProfiles |
Rab-bd_FIP-RBD (IPR019018) - T[385-447] 9.736 |
| Pfam |
Rab-bd_FIP-RBD (IPR019018) - T[400-444] 9.9E-8 |
| SUPERFAMILY |
FIP-RBD_C_sf (IPR037245) - T[417-447] 7.32E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RFIP1_HUMAN | 28.446 % | 94.4 | 1.94E-20 |
| RFIP2_HUMAN | 34.574 % | 89.7 | 3.09E-19 |
| RFIP5_HUMAN | 33.163 % | 88.6 | 1.1E-18 |