- Clone 'AHC0AAA149YH17' >
- Transcript 'Moocul.CG.ELv1_2.S93...' >
- Transcript 'KH2012:KH.C1.96.v1.A...' >
- Transcript 'Moocul.CG.ELv1_2.S93...' >
- Transcript 'Boleac.CG.SB_v3.S30....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S30.g07208.01.t
Possible name(s)
STOM; STOML1; STOML3
Gene model
Location
S30 [523,564 / 524,662]
Amino acid sequence
Length: 365
>Boleac.CG.SB_v3.S30.g07208.01.p
MNAGSQYMNPTRSLTSVLCATFIKFCAYLCFTLTLPFSAFVCLKMVHQYERIVVFRIGHL
LPLKGPGIVLVFPCIDRWSRVDLRTKAFNVPPTRICTADGGLILFGSVVHYRVQNPILVK
NSLQDMNHSVRVACQAAMSKILSKKRFSDLKTSSARSNYDIQMEINDAAIEWGLEIGKVE
LSQPTVEVAPPDEKKSGFFNKLSSGLSSGFGSSGGGDSMAQVMNAMSAAQGFMSPSAPPA
IESSSFTQPATSVTVDVAARTLINAIKCLMNEDMVSKVNATFEIRLSDNKKYYFIDLKNG
LGSCGEGHLPTGMPDATLSLSYETLQGLLTGQIGAFSAFTSGQLDIEGDVKSAMRLEELG
KSLKA
Nucleotide sequence
Length: 1,098
>Boleac.CG.SB_v3.S30.g07208.01.t
ATGAATGCTGGAAGCCAATATATGAATCCTACGCGTTCTTTAACATCTGTGCTTTGTGCT
ACCTTCATCAAGTTTTGTGCGTACCTTTGCTTCACATTAACTTTGCCATTTTCTGCTTTT
GTCTGCTTGAAAATGGTGCATCAGTACGAACGCATCGTTGTCTTTCGCATCGGACATTTG
CTGCCATTGAAAGGACCAGGTATTGTGCTTGTTTTCCCTTGTATTGATCGCTGGAGTAGA
GTGGACCTTCGAACTAAAGCATTCAATGTTCCACCCACAAGAATTTGTACTGCTGATGGG
GGACTTATTCTATTTGGAAGTGTTGTTCATTATCGTGTGCAAAATCCAATTCTTGTGAAA
AACAGCCTGCAGGATATGAATCACTCTGTCCGCGTGGCATGCCAAGCTGCAATGTCCAAA
ATTTTAAGCAAAAAAAGATTTTCTGACTTGAAGACAAGTTCCGCACGAAGTAATTATGAC
ATACAGATGGAGATAAATGATGCCGCTATCGAGTGGGGGCTGGAAATTGGGAAAGTTGAA
TTGTCTCAACCGACAGTTGAAGTTGCCCCACCTGATGAAAAGAAGTCCGGCTTCTTTAAC
AAATTATCATCTGGCTTGTCTAGCGGATTTGGAAGTAGCGGTGGTGGTGACTCCATGGCT
CAAGTAATGAACGCAATGTCTGCAGCTCAAGGATTTATGAGTCCATCTGCTCCCCCAGCA
ATTGAGTCCTCGAGCTTTACACAACCAGCGACGTCTGTTACAGTTGATGTAGCAGCTCGA
ACTCTCATAAATGCAATCAAATGCTTGATGAATGAAGACATGGTTTCCAAAGTTAATGCT
ACATTTGAGATACGACTTTCTGACAACAAAAAATATTATTTTATTGACCTCAAGAATGGA
CTGGGATCGTGTGGCGAAGGCCACTTGCCGACTGGAATGCCTGATGCAACTCTATCTCTA
AGCTACGAAACTTTGCAGGGTTTGTTAACTGGCCAAATAGGAGCATTTTCTGCATTCACC
AGTGGACAGTTGGATATAGAAGGTGATGTAAAGTCAGCAATGAGACTTGAAGAACTTGGG
AAATCCTTGAAAGCATGA
| PANTHER |
SLP1 (IPR028517) - T[5-364] 5.8E-92 |
| SMART |
Band_7 (IPR001107) - T[41-202] 4.1E-16 |
| Pfam |
Band_7 (IPR001107) - T[45-186] 5.5E-10 |
| PRINTS |
Stomatin_fam (IPR001972) - T[48-70] 1.2E-12 - T[95-116] 1.2E-12 - T[130-147] 1.2E-12 - T[150-173] 1.2E-12 |
| SUPERFAMILY |
Band_7/SPFH_dom_sf (IPR036013) - T[72-183] 6.8E-13 |
| Gene3D |
SCP2_sterol-bd_dom_sf (IPR036527) - T[252-365] 3.8E-21 |
| SUPERFAMILY |
SCP2_sterol-bd_dom_sf (IPR036527) - T[263-359] 2.02E-20 |
| Pfam |
SCP2_sterol-bd_dom (IPR003033) - T[272-359] 1.3E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| STOM_HUMAN | 31.515 % | 120 | 1.37E-31 |
| STML3_HUMAN | 31.214 % | 113 | 7.49E-29 |
| STML1_HUMAN | 32.52 % | 213 | 7.62E-66 |