Aniseed - Transcript Card

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S308.g07330.01.t

Possible name(s)

PHF1

Gene model

Boleac.CG.SB_v3.S308.g07330

Location

S308 [7,701 / 13,920]

Sequences

Amino acid sequence

Length: 471

>Boleac.CG.SB_v3.S308.g07330.01.p
MGPANLPAPPAPMLTNPMGQMAKSRQTTIPAWNDPRQIAPFHPQREKTILSDRLPPDKQS
NGRTSQGSFPDKQSSKDDLYLICRTLQRALWNRGPTVSKFNGDPKNYPIFIKNFKLTYWH
ENTDSFAILSRLIEHCTGTAHESIKHLALSDNADEALQTAVQILFGNRSLVIDSYIKDLI
KKDKIKPNDSDGLCKLASQMRTCYMIFSTWGVQNMLDAQTYLEAIFLRLPRNVQNSYFAT
STFMEVLIPSFTHLLKFVEQQAYLYNSFFGKKLSEQDTRSLPPRKVHSKASTFSASSSST
GTIYVLIRISAWFVCGSEQPKNDSHTLFSIGKLCRPVNGFIEVCFPTVQMQTNSSDCWVF
AIAFAVSICRNVRPDVAIFKQSSLRRQCLTMIKSDTVTEMHTKIIEAPPPPAASLKVDIF
CICRLPYAAIQSTMKACSECGRWYHEDCSPVQIPGDAVDETGVSWLCHDCK

Nucleotide sequence

Length: 1,416

>Boleac.CG.SB_v3.S308.g07330.01.t
ATGGGGCCGGCAAACCTACCTGCTCCACCAGCTCCTATGCTCACCAACCCTATGGGACAG
ATGGCTAAATCAAGACAAACTACTATTCCAGCATGGAATGATCCGAGACAAATTGCTCCA
TTTCATCCACAAAGGGAAAAGACAATACTATCTGATCGTCTACCTCCTGACAAACAGTCA
AATGGCCGAACCAGTCAAGGTTCATTCCCTGACAAACAGTCAAGCAAAGATGACTTATAT
TTGATCTGTCGAACCTTGCAACGGGCCTTGTGGAATCGAGGACCTACTGTCTCTAAATTT
AATGGTGATCCGAAAAATTATCCTATCTTCATTAAAAACTTCAAACTGACATATTGGCAT
GAGAACACAGACTCATTTGCTATATTATCAAGACTAATTGAACATTGTACTGGAACTGCA
CATGAATCTATTAAACACTTGGCACTATCGGACAACGCCGATGAAGCCCTACAAACAGCT
GTGCAGATACTGTTTGGGAACAGAAGTCTGGTCATCGATTCGTACATAAAGGACCTGATT
AAAAAGGACAAGATTAAACCAAATGACTCAGACGGACTCTGTAAATTAGCATCGCAAATG
AGAACCTGCTACATGATTTTCTCTACTTGGGGCGTACAGAACATGTTGGACGCTCAAACT
TATTTGGAGGCAATATTTCTGAGATTGCCTAGAAATGTACAAAATTCGTACTTTGCCACT
TCAACATTTATGGAAGTTTTGATCCCGTCATTCACTCACTTGTTGAAATTTGTGGAACAA
CAGGCCTATCTGTATAATTCGTTTTTCGGAAAGAAGTTATCTGAACAGGACACTCGCAGT
TTACCACCTCGTAAAGTGCACTCTAAGGCTTCAACATTCTCTGCATCAAGCTCGTCCACA
GGAACAATATACGTTTTGATACGCATATCCGCCTGGTTTGTTTGTGGTAGCGAGCAGCCG
AAGAACGACAGTCACACGCTCTTTTCGATTGGCAAATTATGTAGACCGGTGAATGGATTC
ATCGAAGTTTGTTTCCCGACGGTACAAATGCAGACAAATTCCAGTGATTGTTGGGTGTTT
GCCATCGCTTTCGCTGTCTCCATTTGCCGTAACGTTAGGCCTGACGTTGCAATATTCAAA
CAGTCTTCTCTTCGACGTCAGTGCCTAACAATGATAAAGTCTGATACTGTCACCGAAATG
CATACCAAAATCATTGAAGCGCCTCCTCCTCCTGCTGCATCTCTCAAGGTTGATATTTTC
TGCATATGCAGACTTCCGTACGCGGCCATTCAAAGTACAATGAAAGCTTGTTCAGAATGT
GGACGTTGGTACCACGAAGACTGCAGTCCTGTACAGATACCAGGTGACGCTGTTGATGAG
ACTGGAGTTTCATGGCTCTGTCATGATTGCAAATGA

InterProScan

SUPERFAMILY	Znf_FYVE_PHD (IPR011011) - T[413-471] 1.07E-10
Gene3D	Znf_RING/FYVE/PHD (IPR013083) - T[414-471] 1.6E-10
ProSiteProfiles	Znf_PHD-finger (IPR019787) - T[418-471] 8.983
SMART	Znf_PHD (IPR001965) - T[420-471] 1.8E-6

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value