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  1. Transcript 'Boleac.CG.SB_v3.S297...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S297.g07011.01.t

Possible name(s)

CLDN14; CLDN19; CLDN2

Location

S297 [155,827 / 157,203]

Sequences

Amino acid sequence

Length: 240

>Boleac.CG.SB_v3.S297.g07011.01.p
MSESVFYGQIGAFFVGFVSTVMCTVTCCWNLWSITSDAESAAVLGAIWGFNGIWIECIQH
TSGSYQCDEYGSSVFNLPSYMNCIRAMMCIAIICSVLGCFTSLVGMQASRLLETVPKKKR
IAVQVTGGFFITAGILTTASLGWYAGMVMTDFFSPENIDNMIRYTIGATFYVGVGSAIFS
FTAGILFLCLAGPKDEEDDDSYNIAQFMNAPDYAFRPSISKRPYYRTENVPLRRNTIQYV

Nucleotide sequence

Length: 723

>Boleac.CG.SB_v3.S297.g07011.01.t
ATGTCTGAGTCGGTGTTCTATGGACAAATTGGAGCATTTTTCGTAGGATTTGTGTCCACG
GTGATGTGTACCGTGACATGTTGTTGGAATTTATGGAGCATAACTAGTGACGCAGAGAGT
GCAGCTGTTCTTGGAGCAATTTGGGGGTTTAATGGAATCTGGATTGAATGTATACAGCAC
ACGTCTGGTTCATATCAATGTGATGAATATGGCTCTTCGGTTTTTAATCTACCATCTTAC
ATGAATTGCATTCGGGCTATGATGTGCATTGCCATCATATGTTCAGTGTTAGGATGCTTC
ACCAGTCTCGTTGGTATGCAAGCAAGCAGATTATTAGAAACCGTTCCCAAGAAAAAACGC
ATCGCGGTTCAAGTAACAGGAGGCTTTTTCATTACTGCCGGTATTTTAACCACTGCATCT
CTGGGTTGGTACGCTGGTATGGTGATGACTGATTTCTTTTCTCCTGAGAATATCGACAAT
ATGATTCGTTACACGATCGGAGCAACNTTTTACGTGGGTGTTGGTAGCGCGATCTTTTCA
TTTACTGCTGGAATTTTGTTTCTGTGCCTTGCGGGACCCAAAGACGAGGAAGATGATGAT
AGCTATAACATAGCTCAATTTATGAACGCACCGGATTATGCTTTCAGACCATCAATCAGT
AAAAGACCATATTATCGGACAGAAAATGTACCGCTCAGGCGAAACACAATACAGTATGTT
TAG

InterProScan

PANTHER
Claudin (IPR006187) - T[5-200] 8.0E-55
Pfam
PMP22/EMP/MP20/Claudin (IPR004031) - T[11-187] 8.4E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CLD19_HUMAN 30.144 % 96.3 2.44E-24
CLD14_HUMAN 31.677 % 88.2 4.38E-21
CLD2_HUMAN 32.653 % 96.7 1.88E-24