- Transcript 'KH2012:KH.L9.32.v1.A...' >
- Transcript 'Phmamm.CG.MTP2014.S7...' >
- Transcript 'Cisavi.CG.ENS81.R58....' >
- Transcript 'Boleac.CG.SB_v3.S28....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S28.g06619.01.t
Possible name(s)
LNX2; RNF125; RNF146
Gene model
Location
S28 [438,497 / 440,057]
Amino acid sequence
Length: 201
>Boleac.CG.SB_v3.S28.g06619.01.p
MDASNNEDAPALPRDYTFDCAICLQPFVQPVRLPCSHIFCFLCAKGIALQGQPCALCRAD
IPIDLLTKPMKFQAKSTPALQGDSNADKHAWFYQGHKGWWQYDERTSAEIEEAYDRKEXS
VDILIAGSIYIIDFEAMVQYQRNANSRKRKIKRDTXSAQKKGVAGMAVHEQAHASSQQDS
HASSNQCTSTASRQSPIGDRN
Nucleotide sequence
Length: 1,334
>Boleac.CG.SB_v3.S28.g06619.01.t
AGTCGCCTACTGCTGCTAGCAACGCCATCGCAGCCCAAGTTGAATAGCATTGTGAGAATG
AGCAGATTGCCGTCGGAGTATGCACAACGCATAGCACATTTAAGTTCCAGGATATTCAGT
GAACCAACTGCCGAGCAGGCGAAGAGGGCACGGAAAATCCTCAAGGTTATGAGTGAAGAA
CCATACTACAAGAAGGAATCTTTAGTGAAATACTATCCACCAATATTTGCGATTGATAAT
TTGATGAAAAGGATAAGAGAATACGGACTATACGTAAACGAACATTTGGACTTCAGAGAG
GAAATGCAACGGCAGAGAGCTGCAAGAGGAAAGTCTAAATAAGTTGACTGTCGATCATAT
CTAGGAACTTTGAAATTTGGGAATTCTTTTTTTGTCTACCTACTACATTGAATTGTTGGA
ATGGATGCTTCAAATAATGAGGATGCGCCTGCTTTACCTCGGGATTACACTTTCGACTGC
GCTATATGCTTACAACCTTTCGTTCAACCAGTCCGACTACCATGCTCCCACATATTTTGC
TTCTTATGTGCTAAGGGCATTGCTTTACAAGGTCAACCATGTGCACTATGCCGTGCAGAC
ATACCAATTGATCTCCTGACAAAACCCATGAAATTCCAAGCGAAAAGTACGCCTGCACTT
CAAGGCGATAGCAATGCAGACAAACATGCATGGTTTTACCAAGGTCACAAAGGCTGGTGG
CAGTATGATGAAAGGACAAGTGCTGAGATTGAGGAAGCGTATGACAGAAAAGAGANAAGT
GTGGATATTCTGATTGCGGGCTCTATATATATTATTGATTTTGAAGCTATGGTACAATAC
CAAAGAAATGCCAATTCAAGGAAAAGAAAAATCAAAAGGGACACTATNAGTGCCCAAAAA
AAAGGAGTTGCAGGCATGGCAGTACATGAACAAGCCCATGCATCATCCCAGCAGGATTCC
CATGCGTCCTCCAATCAATGCACCTCAACTGCATCCAGACAATCTCCAATAGGTGACAGA
AACTAGCAGCGTATTTTTCCCTTATTTTGTCAATTGTATATTCTCTAGTCGATGTGATCA
AGATAACGTATTGCAAACAAAGTGAGCACAACTTTCTTCTGTAGCCTCTTTCGTTTTCTG
TCGTGCCCACCAGCATAAGCAGTGCAAAACATGTTGCAGAAAGCATTGCCATGGTGCTTC
AGACAGTGCAGGTAGAAAATATGACTAGACTGACTGACTAGATTCTGAAAGTGTTCTACC
ACGTATAGGACTAGTTGAAGCTGAAATGTTTTGTCATGCATAACCAGGACTTGATATGAG
TGGGCTAAGAGAAC
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[1-81] 6.1E-14 |
| PANTHER |
RNF146 (IPR033509) - T[10-173] 1.2E-61 |
| SMART |
Znf_RING (IPR001841) - T[20-57] 3.5E-6 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[20-58] 10.896 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[35-44] . |
| SUPERFAMILY |
WWE_dom_sf (IPR037197) - T[64-167] 2.35E-27 |
| ProSiteProfiles |
WWE-dom (IPR004170) - T[76-153] 21.149 |
| Gene3D |
WWE_dom_sf (IPR037197) - T[85-169] 7.2E-29 |
| SMART |
WWE-dom_subgr (IPR018123) - T[86-161] 3.3E-24 |
| Pfam |
WWE-dom (IPR004170) - T[89-153] 1.4E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RN146_HUMAN | 50.676 % | 173 | 5.26E-53 |