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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R19....'
  2. Molecular Tool 'FoxD::Nodal'
  3. Molecular Tool 'Hedgehog2-MO (Imai 2009)'
  4. Molecular Tool 'SoxB1-MO (Imai 2009)'
  5. Transcript 'Boleac.CG.SB_v3.S28....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S28.g06595.01.t

Possible name(s)

OTOGL

Location

S28 [277,365 / 281,472]

Sequences

Amino acid sequence

Length: 345

>Boleac.CG.SB_v3.S28.g06595.01.p
MTTMSQKALVLVVASICFSHIKAWDATFYPRHRRFFQGYISYESYNAPNFFIRHENYVLK
ISRLPNPVPILYKKDASFTEIEDFSAILKTAPTDFASSNFPQRSIGFTTDNLVAIVENDK
EKFRVVTPGLNGQSGTVSLESDRHPGHYLRHKSFMIHLDEVEENGKFADDASYIRHQNYR
LKLHTYDGSPLFKLDASFLRSSAPTTYRREGPYRFVSKNFEDLTISLNDSGIPKIINSGD
DLFYIVRPSLTREGGTVSLASTAFPGHYLRHRNYLLHLDPYEESNVYKGDATFRIHENKF
YQGYVALESSNLRNYFVRHQSFRLKISRNDNSELFRLDSSFKLEQ

Nucleotide sequence

Length: 1,079

>Boleac.CG.SB_v3.S28.g06595.01.t
TATGTGTCGACGTTTGTTAACAAGACTGACACCACTCAACAATGACGACCATGTCTCAAA
AAGCACTCGTGCTGGTCGTAGCGTCGATATGCTTCAGCCATATCAAAGCTTGGGATGCGA
CATTCTATCCCCGTCATCGAAGATTCTTTCAAGGCTACATCTCTTATGAATCGTACAACG
CTCCCAATTTCTTCATTCGTCACGAAAACTATGTTCTGAAAATATCTCGACTACCAAATC
CAGTACCAATTTTGTACAAAAAGGACGCAAGTTTTACAGAAATCGAGGATTTTTCTGCAA
TTCTGAAGACCGCGCCCACTGATTTTGCGAGTTCAAACTTTCCTCAGCGTTCGATCGGTT
TTACTACCGACAATCTAGTTGCGATCGTTGAAAACGACAAGGAAAAGTTTCGAGTTGTCA
CACCTGGATTAAATGGTCAAAGTGGCACGGTCTCATTAGAATCTGATAGACATCCCGGGC
ACTATTTGAGGCACAAGAGCTTTATGATTCATCTAGACGAGGTTGAAGAAAACGGCAAAT
TTGCTGACGACGCTTCATACATCCGCCATCAAAATTACAGATTAAAATTACATACGTATG
ATGGCTCTCCTTTATTCAAATTGGACGCAAGCTTTCTACGCAGTAGTGCTCCAACAACAT
ACCGAAGAGAGGGGCCATATCGGTTTGTATCCAAAAACTTTGAAGACCTCACGATCAGCC
TCAATGATTCGGGAATCCCTAAAATCATTAATTCGGGAGATGATTTGTTCTACATTGTAC
GTCCTAGTTTGACTCGAGAGGGAGGGACAGTGTCACTAGCATCAACTGCATTTCCTGGAC
ATTACCTGCGACATCGTAACTACCTCCTTCATCTTGATCCATATGAAGAAAGCAACGTTT
ATAAAGGAGACGCAACTTTCCGCATTCACGAGAACAAGTTTTATCAGGGCTACGTCGCTT
TGGAATCATCAAACCTCAGAAATTATTTCGTTCGGCACCAAAGTTTCCGTCTGAAAATAT
CTCGAAATGACAATTCGGAATTATTTCGCCTCGACAGTAGTTTCAAGCTGGAGCAGTGA

InterProScan

Pfam
AbfB_ABD (IPR007934) - T[25-79] 1.3E-7 - T[117-173] 1.1E-9 - T[241-342] 1.1E-22
SUPERFAMILY
AbfB_ABD_sf (IPR036195) - T[37-114] 2.09E-8 - T[94-173] 6.41E-13 - T[172-206] 6.28E-6 - T[237-344] 1.57E-21

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value