- Transcript 'Boleac.CG.SB_v3.S26....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S26.g06206.01.t
Possible name(s)
DDX1; DDX17; DDX5
Gene model
Location
S26 [508,243 / 514,040]
Amino acid sequence
Length: 744
>Boleac.CG.SB_v3.S26.g06206.01.p
MTAFEELGAMPELGKAVDEMGWMLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVHESKCDTGTSSSKKSSSNTLTAKWQMNPHDRGKSFATSSDGLLCQCREFKEWQGCR
STRAVTEGKYYYEVTCKDEGLCRVGWSTIEADLNLGTDKFGFGFGGTGKKSFNRQFDTYG
ESFTMHDVIGCYIDVSQGKISFSKNGIDLGHAFDIPGHLRQQPFYATCGVKNAELLFNFG
DSPFKHPPSGGYNALSSASESQSLPSPKSGSAGAARQANKRKPNNAPYAIIIEPSRELAE
QTLNNVVNLKKYVKNPGISEVLIIGGVSPSEQLKCIENGVDIVVATPGRIDDFISSGKLX
LDQVRFLVLDECDGLLSAGNESMIKRMHSKMPQVTPDGKRLQVIVCSATLHSFDVKKLAE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKTDRSYEMLKQDARIKTDGVHYNDRVGPRD
RPSDEKYSEAIKILKGEYCIKAIKKHNMDQCIIFCRTKLDCDNMERYFTKQGGGPKSRGH
LFSCVCLHGDRKPQERRENLEKFKKGEARHLICTDVAARGLDVKGIPFVINVTLPDEKQN
YVHRIGRVGRAERMGLAISLVSIENREKVWYHSNCNNRGKGCYNTSLTDVGGCCIWYDEG
SLLADIEEHLKITIDQVTPDLEIPVNEFDGKVVYGKKRAMKNQSLYKGHADVLAPAVKDL
QALEKAAQTSFLRLAMESFSSRKT
Nucleotide sequence
Length: 2,388
>Boleac.CG.SB_v3.S26.g06206.01.t
ATTTATTCGCTCTGATTTTGTTTTGCCTCTCATCTACTCATCTCGAGCAACCCTCGTCCG
TAAGCTTGGAGCNTAACCCTTCTGTCCGGTACGCACTTGCTCATCTATAGAGTAAGAAAA
ATGACTGCATTTGAGGAACTTGGCGCTATGCCTGAGCTTGGCAAAGCTGTTGACGAAATG
GGCTGGATGCTACCCACTGATATACAAGCTGAATCAATACCTCTTATCCTTGGTGGTGGT
GATGTGTTGATGGCTGCTGAGACGGGATCTGGAAAAACTGGTGCTTTCAGTATTCCCGTA
ATCCAGATCGTCCATGAATCAAAATGCGACACCGGAACAAGCTCCTCAAAGAAGTCTTCA
AGCAATACCTTGACGGCGAAATGGCAGATGAATCCACATGATCGAGGCAAATCATTTGCC
ACAAGTTCTGATGGCCTTCTTTGTCAATGTAGAGAGTTCAAGGAATGGCAAGGCTGTCGC
TCAACAAGAGCTGTCACAGAAGGAAAGTACTACTATGAAGTAACATGCAAGGATGAAGGC
CTTTGTCGTGTGGGGTGGTCCACAATTGAAGCAGATTTAAATCTCGGGACTGATAAGTTC
GGATTTGGGTTTGGGGGAACCGGAAAGAAATCATTCAACCGTCAGTTTGATACATATGGA
GAATCCTTCACAATGCATGATGTTATCGGTTGCTATATTGATGTCAGCCAGGGAAAAATA
AGTTTCTCTAAGAATGGGATCGACCTTGGACATGCTTTCGACATACCTGGACATTTGAGG
CAGCAGCCATTTTATGCTACATGCGGAGTGAAGAACGCTGAGTTACTGTTTAATTTTGGT
GATTCTCCGTTCAAACATCCACCATCTGGAGGATATAATGCTTTGTCATCAGCATCTGAA
TCTCAATCACTACCTTCACCAAAATCTGGTTCAGCTGGAGCTGCCAGGCAGGCAAACAAA
AGAAAGCCCAATAATGCACCATATGCCATCATAATAGAACCATCACGTGAGCTAGCAGAG
CAAACACTGAATAATGTTGTGAACTTGAAGAAATACGTGAAGAACCCGGGTATTTCTGAA
GTTTTGATCATTGGTGGTGTGAGTCCTAGCGAGCAACTCAAATGTATTGAGAATGGAGTT
GATATTGTTGTGGCAACACCAGGGAGAATCGATGACTTCATTTCATCAGGCAAGCTNAGN
CTTGACCAAGTTCGGTTTCTTGTACTGGATGAATGTGACGGATTGCTTTCTGCAGGAAAT
GAAAGCATGATTAAGAGAATGCATTCAAAAATGCCACAGGTTACTCCTGATGGTAAACGT
TTACAAGTAATTGTTTGCTCTGCAACCCTGCATAGCTTTGATGTGAAAAAGCTGGCAGAG
AAAATCATGCATTTCCCAACATGGGTTGATTTGAAAGGCGAGGACTCTGTGCCAGAAACA
GTTCATCATGTTGTGGTACCAGTCAACCCGAAGACGGATAGGAGTTATGAGATGCTGAAG
CAAGATGCCAGAATAAAAACTGACGGAGTACATTACAATGATAGAGTAGGCCCCAGAGAC
AGACCTTCAGACGAGAAATATTCTGAGGCAATCAAAATTTTAAAAGGTGAATATTGCATC
AAAGCGATCAAGAAGCATAATATGGACCAGTGCATCATATTTTGTCGTACTAAACTAGAC
TGTGATAATATGGAGCGTTACTTCACCAAGCAGGGTGGAGGTCCTAAATCAAGAGGACAT
CTATTTTCATGCGTTTGTCTCCATGGAGACCGAAAGCCTCAAGAAAGAAGGGAAAATTTG
GAAAAGTTCAAAAAGGGCGAAGCTCGGCATCTTATTTGCACTGATGTGGCTGCCCGTGGG
CTGGATGTCAAAGGAATTCCTTTCGTTATAAATGTTACGCTGCCAGATGAAAAACAAAAC
TATGTTCATCGCATTGGAAGAGTGGGTCGGGCAGAACGAATGGGATTAGCAATTTCCCTT
GTATCGATAGAGAATAGAGAAAAGGTATGGTACCATAGCAACTGCAATAACCGTGGTAAA
GGGTGCTACAATACATCACTAACTGATGTTGGAGGGTGTTGCATTTGGTATGATGAGGGG
TCGCTGTTAGCTGATATAGAGGAGCATCTCAAGATTACCATTGATCAAGTTACACCAGAC
CTCGAAATTCCTGTGAATGAATTTGACGGAAAGGTGGTCTACGGGAAAAAGCGTGCAATG
AAAAATCAGTCATTATACAAAGGTCATGCCGACGTGTTGGCCCCTGCCGTAAAGGACTTG
CAGGCTCTTGAGAAGGCGGCACAAACTTCTTTTTTAAGATTGGCAATGGAAAGCTTCTCT
TCTCGTAAAACGTGAACTTCTGTAGCTTGTGACAATAAAAGCATTGAC
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[2-30] 9.785 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[2-68] 3.04E-14 - T[287-452] 5.13E-56 - T[495-631] 5.13E-56 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[21-444] 3.8E-45 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[26-418] 8.5E-65 |
| ProSiteProfiles |
B30.2/SPRY (IPR001870) - T[68-244] 18.791 |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[86-247] 3.84E-37 |
| SMART |
SPRY_dom (IPR003877) - T[127-243] 5.2E-28 |
| Pfam |
SPRY_dom (IPR003877) - T[129-240] 3.3E-21 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[284-428] 19.041 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[486-685] 18.421 |
| CDD |
Helicase_C (IPR001650) - T[495-620] 1.79974E-31 |
| Pfam |
Helicase_C (IPR001650) - T[497-611] 1.2E-25 |
| SMART |
Helicase_C (IPR001650) - T[522-612] 2.2E-24 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX1_HUMAN | 67.344 % | 970 | 0 |
| DDX17_HUMAN | 30.499 % | 148 | 4.89E-37 |
| DDX5_HUMAN | 29.565 % | 147 | 3.3E-37 |