- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'Cisavi.CG.ENS81.R31....' >
- Transcript 'Cisavi.CG.ENS81.R98....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R98.82798-90181.03381.t
Possible name(s)
HOXA3; HOXB3; HOXD3
Gene model
Location
R98 [83,001 / 90,181]
Amino acid sequence
Length: 709
>Cisavi.CG.ENS81.R98.82798-90181.03381.p
MNNGHDRMQRTKYSGTESTSQDACSGKKQSNSSLDGLVDFYMGAERATSDGRGIIDNYQQ
SDSAKARIHSNGTSQSRIKSPSYSEQTIVTIASQRPFDLDYEVKGIECDVTEENSTSVIS
QSEFQEFGIYPGSKRVNANNSNNRVGEKENGGLSPAAIFQPVQNRSQESIDKHKLQQGSQ
AVSTTQLVRSVDDKSRVYSPHSAAVVLMSPRGRPLIQTPGSDTSPGARMSKSPPSELRAP
AQTLSSTRGYETTPSSLSFPTNEPQKMDNGAKQQNSNETMTDESGINRDQPAKNGGLKEN
GGNVVSSKHKDPGIFDWMLESRKNQKKKHSSSESNSSPSDVDKCYAANKRERTAYTNSQL
VELEKEFHFSHYLCRPRRIELAQALGLTERQIKIWFQNRRMKFKKEQKQKIAMQRVGVDG
SIMAVHGHQHHYPNPYLRPQPIMYQGEYIGKSIQNNYIGPEVNGGHFPTVADVISDPSAC
DMTNTVSPTHQLQAFVTSSTSRQTAPMHRHAVNPQMTRSPSSGASNASSPPNMKALYQDQ
TATSSVVTSPMNEQRRQNDVTGYYQYRNSNQTNFFEKHTDRGEDKHDDEAVYRSSGLRAN
NQSHASGIRYQHRPITSFSNYAHGGRSQEIGEIPSLHPFSHPGQRNLPHQFLPLYYGSTP
DYISSCSAMGVPVAEKTGPVPLDYSRSAYPPHGDKTILPHGHFQRLTHL
Nucleotide sequence
Length: 2,130
>Cisavi.CG.ENS81.R98.82798-90181.03381.t
ATGAATAATGGGCACGATCGAATGCAGCGGACCAAATATAGCGGGACCGAGTCGACCAGC
CAAGATGCCTGCTCGGGTAAAAAGCAATCTAACTCCAGTCTAGATGGCTTGGTCGACTTT
TATATGGGCGCTGAGCGTGCAACGTCAGACGGTCGAGGAATCATCGACAATTATCAGCAA
TCCGATTCAGCGAAAGCTCGGATTCATTCAAACGGAACCAGTCAGTCTCGAATCAAAAGT
CCAAGCTATTCAGAACAAACAATTGTTACAATTGCGTCACAGAGGCCATTCGATTTAGAT
TATGAGGTAAAAGGAATTGAATGTGATGTCACAGAAGAAAACAGTACGTCAGTGATCTCA
CAAAGCGAATTTCAAGAGTTTGGTATTTACCCGGGCAGTAAGAGGGTCAACGCCAACAAC
AGCAACAACAGAGTTGGAGAAAAGGAAAATGGAGGCTTGAGTCCCGCGGCAATATTTCAA
CCAGTTCAAAACCGGAGCCAAGAAAGTATTGATAAGCATAAGTTACAGCAGGGTAGTCAA
GCTGTATCGACCACTCAGCTGGTAAGAAGCGTTGATGATAAATCGAGGGTTTATTCCCCA
CATTCTGCCGCTGTTGTGTTAATGTCGCCCAGAGGAAGGCCATTAATTCAAACGCCGGGT
AGCGATACATCTCCCGGGGCACGCATGAGCAAGTCACCGCCGTCGGAGCTTCGAGCTCCC
GCGCAGACACTGTCGTCGACTCGAGGTTATGAAACTACACCCTCTTCGCTGAGTTTTCCG
ACGAATGAGCCGCAGAAAATGGATAATGGAGCAAAACAACAAAACTCTAACGAAACAATG
ACAGATGAAAGTGGAATAAACAGGGATCAACCAGCTAAGAACGGCGGATTAAAAGAAAAT
GGCGGAAATGTAGTCAGTTCCAAACACAAGGATCCAGGGATTTTTGATTGGATGTTGGAA
TCACGGAAGAATCAAAAGAAGAAACATTCAAGTTCGGAAAGTAATTCTTCACCAAGTGAT
GTAGATAAATGCTACGCAGCGAATAAACGCGAAAGAACAGCGTATACGAACTCACAACTG
GTCGAATTGGAGAAGGAATTTCACTTCAGTCATTACTTATGCCGACCTCGGAGAATAGAA
CTTGCTCAAGCACTCGGACTGACGGAACGACAAATCAAGATCTGGTTCCAAAACCGTCGG
ATGAAATTCAAGAAGGAACAAAAGCAGAAGATTGCGATGCAACGAGTTGGTGTCGATGGG
TCCATCATGGCGGTCCATGGTCATCAGCACCATTATCCCAATCCTTACCTCAGACCGCAA
CCTATTATGTACCAAGGCGAGTATATTGGGAAGAGCATTCAAAATAATTACATCGGGCCG
GAAGTGAACGGGGGGCATTTCCCGACGGTTGCCGACGTCATATCCGACCCCAGTGCATGT
GATATGACCAACACCGTGTCGCCAACACACCAACTTCAAGCGTTTGTGACATCATCAACC
TCGAGACAAACTGCTCCCATGCACCGTCATGCGGTCAACCCACAAATGACGCGTTCGCCG
TCAAGTGGCGCCAGCAATGCATCTTCTCCACCGAATATGAAAGCACTTTACCAGGACCAA
ACTGCAACGTCATCGGTTGTTACGTCACCAATGAACGAACAAAGACGGCAAAATGACGTC
ACCGGATATTACCAATACAGGAACTCCAACCAAACAAATTTCTTCGAGAAACACACGGAT
CGTGGTGAAGATAAGCACGATGACGAGGCAGTCTACAGGTCATCCGGTTTAAGAGCGAAC
AACCAATCACATGCGAGCGGGATTCGTTACCAACATCGACCTATTACGTCATTCAGTAAT
TACGCGCATGGGGGTCGGTCCCAAGAAATCGGGGAAATCCCCTCACTTCACCCTTTCTCC
CACCCCGGCCAGCGGAACTTGCCCCACCAGTTCCTGCCCCTGTACTACGGTTCCACCCCT
GATTATATATCATCATGCTCAGCAATGGGGGTCCCGGTGGCGGAGAAAACTGGTCCCGTT
CCCCTGGATTACTCGCGATCTGCGTACCCACCCCACGGGGATAAAACAATCCTCCCCCAC
GGCCACTTCCAACGCCTCACCCACTTATAA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[334-408] 5.56E-26 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[346-406] 21.637 |
| SMART |
Homeobox_dom (IPR001356) - T[348-410] 4.9E-28 |
| Pfam |
Homeobox_dom (IPR001356) - T[349-405] 1.8E-21 |
| CDD |
Homeobox_dom (IPR001356) - T[349-407] 2.26781E-24 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[370-381] 1.9E-6 - T[385-395] 1.9E-6 - T[395-404] 1.9E-6 |
| PRINTS |
HTH_motif (IPR000047) - T[377-386] 1.3E-6 - T[386-402] 1.3E-6 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[381-404] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HXD3_HUMAN | 49.007 % | 139 | 1.24E-35 |
| HXA3_HUMAN | 63.551 % | 132 | 6.94E-33 |
| HXB3_HUMAN | 49.219 % | 125 | 1.24E-30 |