Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 1,045

>Cisavi.CG.ENS81.R98.284679-309909.03586.p
LKQYEGRYQCFASNDLGTAMTSAITLKAAASPYQRPENKEINVRTGASITVPCNYSSSND
RVITWTFQPATVTYNERIAESADGSLVFANVLGSDNGLIFYCIVKDLATRKSTDGPHYTL
NVDNTVPLPDRPPTITSPVLTTEPRIVLRDDTLRMKCIATGKPVPSVRWEKLNGNSVVSW
PNGRFRTEDFGRTAVISNASYGDSADYRCTATNALGEATRISKVLVHARPFFSVPENAPH
DVIKTPGSNVTIRCQAEGIPAPEVEWRVNGVPIAETSPMDNRVIHPTKIRISNLKVSDSA
VYQCIASNMHNSIIKQAYVNVLISMPLPVSSEDVEYVQVLGKTVEMKCNVFGSPSPAISW
QKDGNKITENERFLIRKSKYLRISEVTFDDAGAYTCVATNEYGNATLSTSLTVFRRTKIQ
PAAQYRYFVRRGESVTMSVKIDIDDGVVQGPVQWFKSDVLIGRGINYDVNNAAFTDSGSY
KVMVNTSLDHAAVHLTLVVQDIPLPPLDFYVSPKSGGSPLDVTFTWQPAEDNYSPIQEYK
IEFEKDNYRPGKWFPLVDSIPGDRTSFDVTLAAGLRYKFRLWALNGIGWSEAPSAETGSG
IQPPHLAVAPTANPSGVSGKGNTPTNMIITWDPVSPVGRNGPEFGYQITCPNHRFLRILQ
SIWHLNFVFAIPFESYEVVNLPTYTQYIINIMSYNNIGNASVPQDVLGYSGEDVPLSAPS
DVTVETNEDDATVVIVRWQKVDPDSVRGKVLGYIVSYETPSSNELKERSVGDTDMTGIAG
LKPFTDYSFKVAVYNDYSSGPFSQSYVITTPESTPGPPSTMRLRTTTDTGAHIAWGRPQE
ENGDVIGYVIKFVCLNDSTEIGPISVEGTSYVTSQLRPNHMYDVTVAAQTLKGVGETANI
VMSTMAGEAPVAARFNVTAGMTTANVTWYQVGGIPATKYFVEYKKSTEDEWKMSHGSYST
EKTGEGVPLAGLDPGTSYLVRIVSVNAYDQTVSRAIMFKTAGAGELIAGVVGEVWFIVLM
CIIVLLLIIIVIVCLLRRRKGGKYS

Nucleotide sequence

Length: 3,135

>Cisavi.CG.ENS81.R98.284679-309909.03586.t
CTGAAGCAATACGAAGGAAGATATCAGTGTTTTGCCTCCAATGATCTTGGAACCGCAATG
ACAAGCGCAATCACCTTGAAAGCGGCAGCATCGCCCTACCAGCGACCAGAAAACAAGGAA
ATCAATGTCCGTACCGGAGCTTCGATCACAGTACCCTGCAATTACAGCAGTTCGAATGAC
CGAGTGATCACGTGGACGTTCCAACCAGCCACTGTGACGTATAATGAAAGAATTGCAGAG
TCGGCGGACGGGAGTTTGGTATTCGCCAATGTATTGGGTTCGGACAACGGACTGATCTTC
TATTGTATCGTGAAAGACCTGGCGACCAGAAAATCTACAGATGGACCGCATTATACACTA
AATGTGGATAATACTGTTCCACTGCCGGACCGCCCACCAACTATTACGTCACCCGTCCTT
ACTACGGAACCACGAATTGTGCTCAGGGACGACACCTTACGGATGAAATGTATTGCTACG
GGAAAACCGGTACCGAGTGTACGATGGGAGAAATTAAATGGAAATTCGGTCGTTTCGTGG
CCGAACGGTCGATTTCGAACTGAAGATTTCGGACGAACAGCTGTCATTAGCAACGCGAGT
TATGGGGATAGCGCCGATTACAGGTGCACAGCTACGAATGCGTTGGGGGAGGCGACGCGG
ATATCGAAGGTTCTGGTGCACGCTCGACCATTCTTCTCTGTCCCCGAAAATGCGCCTCAT
GACGTCATAAAGACACCTGGTAGTAACGTCACAATACGATGTCAAGCGGAGGGGATTCCC
GCGCCGGAAGTCGAGTGGAGGGTGAACGGGGTTCCGATCGCAGAAACTTCCCCGATGGAT
AACAGAGTGATCCATCCAACTAAAATTCGAATCAGCAATCTGAAGGTGTCTGACTCGGCC
GTGTACCAATGCATCGCTAGCAACATGCATAACTCCATTATTAAACAAGCATATGTGAAT
GTGCTCATTTCTATGCCTTTGCCTGTATCGTCGGAAGACGTGGAATACGTGCAAGTGTTG
GGGAAAACTGTGGAGATGAAATGTAATGTGTTTGGGTCGCCCTCTCCCGCCATCTCGTGG
CAGAAAGATGGAAACAAAATTACAGAAAACGAAAGGTTTCTTATACGGAAAAGTAAATAT
CTTCGCATCAGTGAAGTAACATTCGACGATGCTGGAGCCTACACTTGCGTAGCGACAAAT
GAATACGGGAACGCAACACTCAGCACCTCACTTACAGTGTTCCGTCGTACGAAGATACAA
CCAGCTGCCCAATACCGCTATTTCGTCAGGCGGGGAGAATCAGTCACTATGTCTGTTAAG
ATTGACATTGATGACGGTGTGGTACAAGGACCAGTTCAATGGTTCAAATCCGATGTTCTT
ATTGGACGAGGAATCAATTATGACGTCAACAATGCGGCATTCACGGATAGCGGAAGCTAC
AAGGTCATGGTTAACACCAGTCTTGACCACGCGGCTGTGCACTTGACTCTGGTTGTTCAA
GATATCCCATTACCTCCGCTGGATTTCTATGTTTCTCCCAAATCGGGGGGATCCCCCCTG
GATGTAACGTTCACATGGCAACCAGCTGAAGACAATTACTCCCCGATACAAGAATACAAG
ATAGAATTTGAGAAAGACAACTATCGACCGGGGAAGTGGTTTCCATTGGTCGATTCGATA
CCTGGCGACCGAACCTCTTTCGATGTAACCTTGGCAGCTGGGTTGCGATATAAATTCCGC
TTGTGGGCGCTAAACGGCATTGGGTGGAGCGAGGCGCCCAGTGCTGAGACAGGCTCCGGT
ATACAACCCCCCCACCTAGCGGTAGCTCCAACAGCAAACCCAAGTGGGGTGTCGGGCAAG
GGGAATACCCCAACCAATATGATCATCACGTGGGACCCGGTGAGCCCAGTGGGGCGTAAC
GGACCGGAATTCGGGTACCAGATTACTTGTCCTAACCATCGTTTTCTCCGTATATTGCAA
AGTATATGGCATTTAAATTTTGTTTTTGCCATACCTTTCGAATCTTATGAAGTAGTCAAC
CTTCCAACATACACCCAATACATCATTAACATTATGAGCTACAATAATATCGGTAACGCT
TCCGTACCGCAAGACGTACTGGGATACTCTGGCGAAGACGTTCCATTGTCTGCTCCAAGT
GATGTCACAGTTGAAACAAACGAAGATGACGCAACAGTGGTGATTGTGAGGTGGCAAAAA
GTTGACCCAGATTCAGTAAGAGGAAAAGTGCTGGGTTACATCGTGTCCTACGAGACACCT
TCAAGCAATGAACTGAAAGAAAGAAGTGTGGGCGACACCGATATGACAGGAATCGCTGGA
CTCAAACCTTTCACCGATTACTCGTTTAAAGTGGCCGTGTACAACGACTATTCCAGCGGA
CCATTCTCCCAATCCTACGTCATAACCACCCCTGAAAGCACCCCCGGCCCCCCATCTACT
ATGAGACTCCGTACAACAACCGATACTGGGGCACACATTGCATGGGGACGCCCCCAAGAA
GAGAATGGTGATGTCATCGGCTATGTGATCAAATTCGTATGCTTGAACGATTCAACTGAA
ATTGGACCAATCAGCGTCGAAGGTACATCTTACGTCACCTCTCAGTTGCGTCCGAATCAT
ATGTATGACGTCACAGTGGCCGCGCAAACTTTAAAGGGGGTCGGTGAAACAGCAAACATT
GTGATGTCAACAATGGCGGGAGAAGCCCCGGTTGCCGCAAGATTCAATGTAACTGCTGGT
ATGACAACTGCAAACGTCACGTGGTATCAGGTGGGGGGAATTCCCGCAACCAAGTATTTC
GTCGAATACAAGAAATCAACTGAAGACGAGTGGAAAATGAGCCATGGTTCTTATTCTACT
GAGAAAACCGGCGAGGGCGTGCCGCTGGCTGGTCTCGATCCCGGTACCTCCTACTTAGTG
AGAATAGTGTCGGTGAACGCGTATGACCAGACGGTGTCACGAGCTATCATGTTCAAAACG
GCCGGCGCAGGTGAATTGATCGCTGGGGTTGTCGGCGAAGTTTGGTTCATCGTGCTAATG
TGCATCATTGTCCTGCTGCTGATTATCATCGTCATAGTGTGCCTTCTTCGTCGACGGAAA
GGCGGAAAGTATTCA

InterProScan

Gene3D	Ig-like_fold (IPR013783) - T[30-127] 1.0E-9 - T[129-235] 3.4E-15 - T[236-322] 8.2E-19 - T[329-414] 6.1E-21 - T[490-605] 1.9E-16 - T[608-713] 2.4E-14 - T[714-816] 3.6E-19 - T[817-912] 3.4E-15 - T[913-1006] 7.4E-9
ProSiteProfiles	Ig-like_dom (IPR007110) - T[36-123] 7.722 - T[133-222] 10.499 - T[230-320] 12.423 - T[326-412] 13.639
SMART	Ig_sub (IPR003599) - T[38-123] 0.012 - T[142-227] 7.2E-6 - T[239-322] 3.6E-11 - T[333-414] 3.7E-11 - T[424-500] 2.4
SUPERFAMILY	Ig-like_dom_sf (IPR036179) - T[38-108] 2.12E-8 - T[142-232] 3.1E-16 - T[228-321] 2.09E-17 - T[337-415] 8.08E-22 - T[427-528] 3.77E-6
SMART	Ig_sub2 (IPR003598) - T[44-109] 2.0 - T[148-216] 3.3E-11 - T[245-311] 4.7E-11 - T[339-403] 4.9E-18
Pfam	Ig_I-set (IPR013098) - T[340-413] 2.9E-20
SUPERFAMILY	FN3_sf (IPR036116) - T[501-706] 1.33E-16 - T[717-910] 5.08E-34 - T[920-1002] 1.12E-9
SMART	FN3_dom (IPR003961) - T[503-590] 2.8E-4 - T[611-701] 0.011 - T[716-800] 1.9E-7 - T[815-895] 3.2E-9 - T[910-993] 0.0081
CDD	FN3_dom (IPR003961) - T[503-597] 2.08489E-11 - T[613-698] 2.98905E-5 - T[717-810] 7.56493E-12 - T[815-901] 7.27566E-12 - T[922-988] 4.00097E-6
ProSiteProfiles	FN3_dom (IPR003961) - T[505-604] 15.487 - T[613-717] 10.525 - T[718-813] 18.643 - T[817-909] 15.645 - T[910-1003] 10.462
Pfam	FN3_dom (IPR003961) - T[717-803] 5.6E-11 - T[817-896] 5.6E-8 - T[920-987] 5.0E-7