- Transcript 'Cisavi.CG.ENS81.R9.2...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R9.2823777-2833362.18817.t
Possible name(s)
CDH11; CDH18; CDH8
Gene model
Location
R9 [2,823,776 / 2,833,362]
Amino acid sequence
Length: 910
>Cisavi.CG.ENS81.R9.2823777-2833362.18817.p
MKTLVWLTLLSSIANAITTIPVDVPKDAMPGTVIAKLPVSFTNLKFVQKEDRVLLKIAKE
ADGYVLKLKAPASKLRTNTVLLKYRLSGAYENKMIKLKFNLKMLSQKHNNIYRVDGLYKR
IVALRSGSKKSKVLSRQKRWEFNSYSVSENREDQLIARLRSSYDNYTGTVIYSISGRGAD
SLFQIEPLSGHLFLKQKLDREMQSSYKLNVSAHDGNGVPLEPASEITIDVLDENDNPPEF
APGPHHARVKERSPSGTKVADVIARDADDPQQPYGQIRYSLLPSPGDATNKFMIHHERGT
VSTITSNLDREESATYELVIQARDDPNARLSFSATTTLTISVIDVNDSPPVFVNEPYKPI
IAEDAKIGSEIVRLSTTDADVGENAQSIYVIEDGDDSAMFSIEAIDNLGVLKVKKRLDYE
TAPDHKYSVRVRARNTHPDPNLAYLGSMDDVTDVVITVTDVNEPPEFTEVNYEFSVREDA
IRGFPIRAVTAIDPEGDAFSYFLRDESKRFAIDAVSGMISVAGELDRELQATYDVTVYAG
SPGDLDFRSTARITISISDVNDNPPHPLDGDKVQVILCDNQHEKGQILHPKIKFTDPDSP
INGQPFTYYSTEHDNYKHFELVDNDDGTASLRTAHRGYSSSIREYELPLIVEDNGNPKLN
ATYTITVRACHCSESGKELCDAAALTGAVRFELLLIILGVVVLFLVFVVILITVRRRRHH
RAELLLKASISSSEDDVRENIISYNEEGGGEEDTAAFDLSALQRDYCSSSSGSQFKHRLD
FSSPPSTKVSTVPPYVPPLNGVSPDIRDFINGRKEGEDVDDSRLAFDSLQIYAYEGEGSD
AGSLSSLASGSDDSDQNYDYLRDWGPRFDKLANIYGSGRPQWSDGECASVSPPTSYLSSR
GTMGRRKTAL
Nucleotide sequence
Length: 3,166
>Cisavi.CG.ENS81.R9.2823777-2833362.18817.t
CTGACAAGCTAAGATGAAAACACTTGTTTGGCTTACATTGCTTTCGTCGATTGCAAATGC
GATCACTACAATACCAGTCGATGTACCGAAGGACGCAATGCCTGGAACTGTGATAGCGAA
ACTACCGGTTTCGTTTACGAATTTAAAGTTCGTTCAAAAGGAAGATCGAGTGTTGTTAAA
GATCGCCAAAGAAGCGGATGGATATGTTTTAAAGCTAAAAGCCCCTGCGTCGAAGCTTCG
CACAAACACAGTGCTGTTGAAATATCGCCTTTCTGGCGCATACGAAAACAAGATGATCAA
ATTGAAGTTTAATTTAAAGATGCTGTCACAGAAACACAACAATATTTATCGAGTTGATGG
ACTTTATAAAAGAATTGTCGCATTACGATCTGGCTCTAAAAAGTCAAAAGTGCTGAGTCG
GCAAAAACGTTGGGAATTCAATTCATATTCAGTGTCGGAGAATAGAGAAGACCAGTTGAT
TGCAAGGCTACGGTCATCATACGACAATTACACCGGTACAGTTATCTACAGTATATCGGG
TCGAGGCGCCGATTCCTTGTTCCAAATCGAACCTCTCAGCGGCCACCTTTTCCTTAAGCA
GAAACTCGATCGGGAAATGCAGAGCTCTTACAAATTGAACGTGTCAGCACACGACGGCAA
CGGGGTCCCACTCGAACCAGCGAGTGAAATTACGATCGACGTGTTGGATGAAAACGACAA
CCCTCCAGAGTTTGCACCCGGCCCGCACCACGCTAGGGTCAAGGAAAGATCGCCCAGCGG
TACCAAGGTCGCTGACGTCATAGCACGTGACGCGGACGACCCGCAGCAGCCATACGGTCA
GATTCGCTACTCCTTGCTCCCGTCACCAGGTGACGCTACTAACAAGTTTATGATCCACCA
CGAGAGGGGGACAGTGAGCACGATCACTTCGAATCTGGACAGAGAAGAGAGCGCCACCTA
TGAACTAGTTATTCAGGCGAGGGACGATCCAAACGCTCGACTCAGCTTCTCCGCCACTAC
CACACTCACAATCTCAGTTATCGACGTGAATGATAGTCCACCGGTATTCGTCAACGAGCC
ATACAAGCCAATTATTGCCGAGGATGCCAAAATCGGATCCGAAATTGTCCGACTTTCGAC
CACAGATGCTGACGTAGGTGAAAACGCACAAAGTATCTACGTCATCGAGGACGGAGATGA
CTCAGCAATGTTCAGCATAGAGGCTATCGATAACTTGGGTGTTCTCAAAGTCAAAAAGAG
ATTGGACTACGAAACCGCCCCCGACCACAAGTACAGCGTCAGGGTTCGTGCAAGGAACAC
CCATCCAGACCCCAACCTCGCCTACCTCGGTTCAATGGACGACGTCACTGATGTCGTCAT
CACTGTGACCGACGTCAACGAACCGCCAGAGTTCACGGAAGTCAATTACGAATTCTCAGT
TCGGGAAGACGCTATCCGGGGATTCCCCATTCGAGCAGTGACCGCGATTGACCCGGAAGG
CGACGCGTTCAGCTACTTCCTGAGAGACGAAAGCAAGCGATTCGCGATTGACGCCGTTTC
CGGTATGATCTCGGTCGCTGGAGAACTTGACCGCGAACTGCAGGCAACATATGACGTCAC
AGTGTACGCCGGGTCGCCAGGCGATTTGGATTTCCGAAGCACCGCTCGTATTACCATCTC
GATAAGCGATGTGAACGACAACCCGCCGCATCCGCTAGATGGCGACAAAGTACAAGTTAT
ATTATGCGATAATCAGCACGAAAAGGGACAGATCTTGCACCCGAAGATAAAGTTCACCGA
CCCTGATTCGCCCATCAACGGGCAACCTTTCACCTACTACAGCACAGAACATGACAACTA
CAAGCATTTTGAACTCGTCGATAACGACGATGGCACCGCCAGTCTTCGCACAGCCCACCG
AGGCTACTCGTCTTCAATTCGAGAATACGAACTTCCGCTCATCGTGGAAGACAATGGGAA
CCCGAAGCTCAACGCGACTTACACCATCACAGTGCGCGCTTGTCATTGTTCCGAGAGCGG
GAAAGAGCTGTGTGACGCGGCTGCCTTGACAGGAGCGGTGCGGTTCGAACTGTTGTTGAT
TATTCTGGGAGTTGTGGTGCTGTTCTTAGTGTTCGTTGTTATTCTCATCACGGTTCGGCG
CCGTCGCCACCACCGCGCTGAGCTTTTGCTCAAAGCGAGCATCAGTTCGAGTGAGGACGA
CGTCAGAGAGAACATCATCTCGTACAACGAGGAGGGGGGTGGCGAAGAAGATACAGCGGC
GTTTGATCTCAGCGCCCTCCAGCGGGACTACTGCAGCAGCTCTTCCGGATCTCAATTCAA
ACACCGACTAGATTTCTCAAGCCCCCCATCCACGAAAGTGAGCACGGTACCACCATACGT
ACCCCCTCTAAACGGGGTTTCCCCCGATATACGAGACTTCATCAACGGGCGCAAGGAAGG
CGAGGATGTGGATGACTCGAGGTTGGCGTTCGATTCACTTCAGATCTACGCATACGAAGG
AGAAGGGTCGGATGCTGGTTCATTGAGCAGCTTGGCGAGCGGATCGGACGATTCTGACCA
GAATTACGACTACCTTCGTGACTGGGGACCCAGATTCGACAAGTTGGCTAACATTTACGG
ATCGGGTCGACCGCAGTGGTCCGACGGGGAATGCGCGTCTGTTTCCCCGCCAACCTCGTA
TCTGAGCAGCCGAGGAACGATGGGACGCAGGAAAACAGCGCTTTGATGAGCGCGACATGT
CGGCCATGAAAGAAATGGCGAGAACAGAGAAGCCCAAGCGCAAAGAGACAGTTTCCAGAT
AAAATACATTTCCTTCAATTAGAAATCATAGTTTTTTTTGATCGTTAAGTCGATCGTTTG
CCACGAATATGCTTCAAGTGGGAATTTCCCTTCTTTCGTTTTTTCTTCAGCTTTTTGTAG
ATCGTAGCGTATTATTTCCATTTTAACAGTGATTTTCTACGTACAACATTATTTTTTACT
TCGGTTGCCAACAGCTGTTCGTTTTCTATTTCGCAATATATGATTCTAACGTTTCAATAA
AATCATTTCTTTGAAAAGGTCAGGTTTTTGCCGTATTTGGAATATTCCTTTGGCCTATCC
ACAAAAAACTTGGTTTCTGAATAAAGTCATTTAGCAAGTTTTAATA
| Pfam |
Cadherin (IPR002126) - T[144-231] 1.8E-11 - T[246-342] 1.8E-16 - T[361-458] 3.7E-12 - T[472-557] 2.9E-9 |
| SUPERFAMILY |
Cadherin-like (IPR015919) - T[146-240] 2.14E-16 - T[234-344] 3.43E-22 - T[345-460] 4.43E-18 - T[456-567] 1.43E-20 - T[589-670] 4.43E-10 |
| SMART |
Cadherin (IPR002126) - T[155-238] 1.0E-14 - T[262-350] 3.5E-22 - T[374-466] 1.8E-12 - T[489-565] 2.6E-16 |
| PRINTS |
Cadherin (IPR002126) - T[181-200] 3.8E-34 - T[240-269] 3.8E-34 - T[315-327] 3.8E-34 - T[331-350] 3.8E-34 - T[465-478] 3.8E-34 - T[515-541] 3.8E-34 - T[549-566] 3.8E-34 |
| ProSitePatterns |
Cadherin_CS (IPR020894) - T[228-238] . - T[555-565] . |
| Pfam |
Cadherin_cytoplasmic-dom (IPR000233) - T[729-877] 9.6E-47 |
| Gene3D |
Catenin_binding_dom_sf (IPR027397) - T[786-880] 3.0E-30 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CAD11_HUMAN | 37.58 % | 408 | 1.88E-129 |
| CAD18_HUMAN | 36.909 % | 427 | 1.19E-136 |
| CADH8_HUMAN | 38.59 % | 416 | 1.37E-132 |