- Transcript 'Cisavi.CG.ENS81.R91....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R91.554001-557721.01461.t
Possible name(s)
NKX6-1; NKX6-2; NKX6-3
Gene model
Location
R91 [554,000 / 557,721]
Amino acid sequence
Length: 317
>Cisavi.CG.ENS81.R91.554001-557721.01461.p
GHGSVMAAAMYLGGSGIANAVSNLGGSRYPKPLADLPGRAPIYWPGMITEDWREKLTMPG
SPSTIVMEKYGRKKHTRPTFSGQQIFALEKTFEQSKYLAGPERARLAYSLAMTESQVKVW
FQNRRTKWRKRHAAEMATAKKRQDGEVSQKVRERERDESDSGQKEPTNCDSSSPKSQGSF
ADIRHISSSVQQYDNAENFSDSSAESQSNSRRCTDQEGSDSTDDDVKPIYQTTPDNCSET
EAESEKERQFKALLYGGYKVRNDVFNGSTNATPATTNYVTQFSVCPSDIMASTSHGLNML
AANKATIANVCGLGVGS
Nucleotide sequence
Length: 1,279
>Cisavi.CG.ENS81.R91.554001-557721.01461.t
GGTCATGGGTCGGTAATGGCGGCAGCGATGTACTTGGGAGGATCTGGGATCGCGAACGCC
GTTTCCAACCTTGGCGGCTCACGCTACCCGAAACCGTTGGCCGATCTCCCGGGCCGAGCC
CCGATCTACTGGCCCGGGATGATAACAGAAGATTGGAGGGAAAAACTGACGATGCCAGGT
TCCCCGTCCACTATCGTAATGGAGAAATACGGTCGGAAGAAACACACGAGACCCACTTTC
TCGGGGCAGCAGATCTTCGCGTTAGAAAAAACATTTGAACAAAGCAAATACCTCGCTGGG
CCCGAGCGAGCACGACTTGCTTATTCCCTAGCTATGACGGAATCTCAGGTTAAAGTCTGG
TTCCAGAACCGGAGAACAAAATGGCGCAAGCGTCACGCAGCCGAAATGGCGACGGCGAAG
AAACGCCAAGATGGCGAAGTCTCACAAAAGGTGCGGGAACGTGAACGCGACGAATCGGAT
TCTGGACAGAAGGAGCCAACGAACTGCGATTCGAGCAGCCCGAAAAGCCAAGGATCGTTC
GCCGACATCCGACACATTTCGTCATCAGTGCAGCAATATGACAACGCGGAAAATTTCTCC
GATTCGAGCGCTGAGTCACAAAGCAATTCGCGACGATGTACCGACCAAGAGGGGAGCGAT
AGTACAGACGATGACGTCAAACCTATCTACCAAACCACCCCGGATAACTGCTCGGAGACA
GAAGCGGAATCAGAGAAGGAACGACAATTCAAAGCTTTGCTCTACGGAGGTTACAAAGTC
CGAAATGACGTATTCAACGGTTCAACAAACGCAACGCCAGCAACGACTAACTACGTCACT
CAATTTTCTGTTTGCCCGAGTGACATCATGGCCTCTACGTCACATGGACTGAATATGTTG
GCGGCTAACAAGGCCACCATTGCTAATGTATGTGGGCTGGGTGTGGGCTCGTCCATCGGC
TCGTTAAATTAGAATTCGCAAGTCCACGGTCCACCCGCTACTCACGATACACTAAACGCA
ACTGGGGCACCTGGTTTGGCTAAATATTAACCCCCTCTATACGTCACACAGTTACTTTAC
ATTCTCTTTTCAAACGTTGTTTGAACGTAGCGTTTACGCAACAGTATAACAAGTGTTATT
GTATGGCCCGTGAGACTGTCTGTCAATCAAATAATCATAGATAATTCCATATATTTTGAA
CCTTGGGCCTTAAATGCTATAATTAGTTTGTAATTTATTGACAGCCCTTTTCCATTTTGC
GTCTCGTGCTCCCATTTTA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[57-131] 2.35E-22 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[71-131] 19.629 |
| SMART |
Homeobox_dom (IPR001356) - T[73-135] 2.1E-21 |
| CDD |
Homeobox_dom (IPR001356) - T[74-132] 1.06282E-19 |
| Pfam |
Homeobox_dom (IPR001356) - T[74-130] 6.0E-20 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[95-106] 1.0E-5 - T[110-120] 1.0E-5 - T[120-129] 1.0E-5 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[106-129] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NKX62_HUMAN | 67.669 % | 191 | 2.02E-59 |
| NKX61_HUMAN | 65.753 % | 199 | 1.89E-61 |
| NKX63_HUMAN | 69.767 % | 126 | 1.25E-34 |