Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 531

>Cisavi.CG.ENS81.R90.157537-165404.15940.p
MSITSDEVNFLVYRYLQESGFQHSAFMFGLESHISQSNINGALVPPAALISIIQKGLQYV
EAEISINPDGLVYEGRFTEGLSLVDAVMPDVVLAKQQQLNEKILAEKQKKEKLEKIITTP
ILTATIKQESPQTNGQHNVIVTNVTSTTQNESSEPMEVDVNHSDITVSLNKSTVLRGHDS
EVFICAWNPVQDLLASGSGDSTARIWNMKEEMANCSPSGALNRQQLVLRHCIKDGNQEVP
SNKDVTSLDWNCDGTLLATGSYDGYARLWATNGRLENVLGQHKGPIFALKWNKKGNYILS
AGVDKTTIIWDATTGEAKQQFPFHQAPALDVDWQNNTCFASCSTDMSIHVCRLGLDRPVK
TFDGHSNEVNAIKWDPSGSLLASCSDDMTLKVWSMNQDSFVHDLRAHSKEIYTIKWSPAG
PGSNNPNQNLMLASASFDSTVRLWELEKGACLHTLTKHHEPVYSVAFSPDGRLLASGSFD
KCVHIWSTQTGKLVHSYEGTGGIFEVCWNSSGNKVGASASDGTVCVLDLRK

Nucleotide sequence

Length: 1,831

>Cisavi.CG.ENS81.R90.157537-165404.15940.t
ATGAGCATAACATCAGATGAAGTAAACTTTCTAGTCTATCGCTATTTACAAGAATCAGGA
TTCCAGCACAGTGCATTCATGTTTGGCCTTGAGTCTCACATCAGTCAATCAAATATAAAT
GGAGCACTTGTGCCTCCTGCTGCTCTTATTTCTATCATACAAAAGGGGCTACAATATGTG
GAAGCCGAAATAAGTATTAACCCAGATGGATTGGTTTATGAAGGCAGATTTACAGAAGGA
CTTTCACTAGTTGATGCTGTGATGCCTGATGTTGTTCTTGCCAAACAACAACAATTAAAT
GAAAAAATCTTGGCTGAGAAACAGAAAAAGGAGAAATTAGAGAAAATTATAACTACACCC
ATCCTCACAGCCACTATAAAGCAAGAAAGTCCCCAAACCAATGGCCAGCATAATGTAATA
GTTACGAATGTCACCTCTACAACGCAAAACGAGTCAAGTGAACCGATGGAAGTTGACGTG
AACCACTCCGATATAACCGTTTCTTTAAATAAATCTACGGTCCTACGTGGCCACGACTCT
GAAGTCTTTATTTGTGCGTGGAATCCGGTCCAAGACCTCCTTGCCTCAGGGTCTGGTGAC
TCTACTGCTCGAATATGGAACATGAAAGAAGAAATGGCGAACTGTAGTCCAAGTGGTGCA
CTTAACAGACAGCAGTTGGTTTTACGACATTGTATTAAAGATGGCAACCAAGAAGTTCCA
AGTAATAAAGATGTTACTTCACTGGACTGGAATTGTGATGGAACACTATTAGCCACCGGT
TCTTATGATGGCTATGCACGATTATGGGCCACCAATGGACGCCTTGAGAATGTACTTGGC
CAACATAAAGGTCCCATCTTCGCATTGAAATGGAACAAAAAAGGAAATTACATACTAAGT
GCAGGTGTGGACAAAACCACCATTATATGGGATGCTACTACTGGAGAGGCAAAGCAACAG
TTTCCATTTCATCAAGCACCTGCCCTTGATGTGGACTGGCAAAACAATACTTGCTTTGCA
TCGTGCTCCACCGATATGAGTATTCATGTGTGTAGATTGGGACTGGATAGACCTGTAAAA
ACTTTCGATGGCCATTCAAATGAAGTAAACGCCATAAAATGGGATCCGTCGGGCAGCCTT
CTTGCCTCGTGTTCAGATGACATGACGTTAAAGGTGTGGTCGATGAACCAAGACAGCTTC
GTGCATGACTTAAGAGCACACAGTAAAGAAATCTACACAATAAAATGGAGTCCTGCTGGC
CCAGGATCAAATAACCCAAACCAGAACCTTATGTTGGCAAGTGCCTCTTTCGATTCCACT
GTTCGTTTATGGGAGTTGGAAAAAGGAGCATGCCTTCATACTTTGACAAAGCACCATGAA
CCAGTTTATTCGGTGGCATTTAGTCCTGATGGTCGGTTGCTTGCCAGTGGTTCATTTGAT
AAGTGCGTTCACATCTGGAGTACTCAGACGGGCAAATTAGTTCACAGTTACGAAGGCACT
GGTGGAATATTTGAAGTTTGTTGGAATTCAAGTGGAAATAAAGTGGGAGCAAGTGCATCT
GATGGGACGGTCTGCGTGTTAGACCTGCGGAAGTGATATGCTGGCAACGAACTCTATGGC
ATCATCTAGCGGTCGGCAATTCGCGGTTGAGCGCACCGTGCGAAGTGCAAACGTCGAACA
TTAAAATGTCGGGTGGCGAACAGCGACGGTCTGGGCGACGAGTCGTGAGACGACAGATTG
CGTCCTATATTCTAGTTTTTTATTATTGCTTTTGTGACATGACATTACGATTTGTTGTGT
TTCCTCATCCGCCAATACAATTGAGCACCTA

InterProScan

ProSiteProfiles	LisH (IPR006594) - T[4-36] 10.537
SMART	LisH (IPR006594) - T[4-36] 6.1E-6
Pfam	LisH (IPR006594) - T[6-32] 5.2E-9
Gene3D	WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[162-531] 2.1E-160
SMART	WD40_repeat (IPR001680) - T[168-207] 6.7E-8 - T[225-270] 2.4E-4 - T[272-311] 3.5E-7 - T[314-352] 0.022 - T[355-394] 2.3E-11 - T[397-445] 1.3E-7 - T[448-487] 3.4E-12 - T[490-528] 0.0084
SUPERFAMILY	WD40_repeat_dom_sf (IPR036322) - T[170-530] 4.94E-78
Pfam	WD40_repeat (IPR001680) - T[172-207] 2.7E-5 - T[242-269] 8.6E-5 - T[277-311] 0.0011 - T[357-394] 7.9E-10 - T[401-444] 0.0011 - T[449-487] 5.9E-10 - T[491-526] 0.043
ProSiteProfiles	WD40_repeat_dom (IPR017986) - T[175-496] 52.756
ProSiteProfiles	WD40_repeat (IPR001680) - T[175-209] 13.884 - T[245-269] 10.107 - T[279-320] 13.416 - T[362-403] 16.223 - T[404-454] 11.678 - T[455-496] 16.657
PRINTS	G-protein_beta_WD-40_rep (IPR020472) - T[194-208] 9.1E-7 - T[381-395] 9.1E-7 - T[432-446] 9.1E-7
ProSitePatterns	WD40_repeat_CS (IPR019775) - T[194-208] . - T[298-312] . - T[432-446] .