- Transcript 'Cisavi.CG.ENS81.R90....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R90.157537-165404.15937.t
Possible name(s)
TBL1X; TBL1XR1; TBL1Y
Gene model
Location
R90 [157,536 / 164,387]
Amino acid sequence
Length: 541
>Cisavi.CG.ENS81.R90.157537-165404.15937.p
QTTGLKMSITSDEVNFLVYRYLQESGFQHSAFMFGLESHISQSNINGALVPPAALISIIQ
KGLQYVEAEISINPVRQNYCFAIKIISSLQQPDDGLVYEGRFTEGLSLVDAVMPDVVLAK
QQQLNEKILAEKQKKEKLEKSEDSNNTNNAVSANDAITNVTSTTQNESSEPMEVDVNHSD
ITVSLNKSTVLRGHDSEVFICAWNPVQDLLASGSGDSTARIWNMKEEMANCSPSGALNRQ
QLVLRHCIKDGNQEVPSNKDVTSLDWNCDGTLLATGSYDGYARLWATNGRLENVLGQHKG
PIFALKWNKKGNYILSAGVDKTTIIWDATTGEAKQQFPFHQAPALDVDWQNNTCFASCST
DMSIHVCRLGLDRPVKTFDGHSNEVNAIKWDPSGSLLASCSDDMTLKVWSMNQDSFVHDL
RAHSKEIYTIKWSPAGPGSNNPNQNLMLASASFDSTVRLWELEKGACLHTLTKHHEPVYS
VAFSPDGRLLASGSFDKCVHIWSTQTGKLVHSYEGTGGIFEVCWNSSGNKVGASASDGTV
N
Nucleotide sequence
Length: 1,720
>Cisavi.CG.ENS81.R90.157537-165404.15937.t
TGTGATGATCTATAGTTAAATGGAACACATTAAATAGGTATATCTATTATCAATAATTTA
ATATTGGACATACACCCTGTGTTGAAGGCAAAAGGCACAAACAACTGGTTTGAAGATGAG
CATAACATCAGATGAAGTAAACTTTCTAGTCTATCGCTATTTACAAGAATCAGGATTCCA
GCACAGTGCATTCATGTTTGGCCTTGAGTCTCACATCAGTCAATCAAATATAAATGGAGC
ACTTGTGCCTCCTGCTGCTCTTATTTCTATCATACAAAAGGGGCTACAATATGTGGAAGC
CGAAATAAGTATTAACCCAGTACGTCAAAACTATTGTTTTGCTATAAAAATCATATCTAG
TCTACAACAACCTGATGATGGATTGGTTTATGAAGGCAGATTTACAGAAGGACTTTCACT
AGTTGATGCTGTGATGCCTGATGTTGTTCTTGCCAAACAACAACAATTAAATGAAAAAAT
CTTGGCTGAGAAACAGAAAAAGGAGAAATTAGAGAAAAGTGAAGATTCAAATAACACAAA
CAATGCTGTGTCTGCAAATGATGCAATTACGAATGTCACCTCTACAACGCAAAACGAGTC
AAGTGAACCGATGGAAGTTGACGTGAACCACTCCGATATAACCGTTTCTTTAAATAAATC
TACGGTCCTACGTGGCCACGACTCTGAAGTCTTTATTTGTGCGTGGAATCCGGTCCAAGA
CCTCCTTGCCTCAGGGTCTGGTGACTCTACTGCTCGAATATGGAACATGAAAGAAGAAAT
GGCGAACTGTAGTCCAAGTGGTGCACTTAACAGACAGCAGTTGGTTTTACGACATTGTAT
TAAAGATGGCAACCAAGAAGTTCCAAGTAATAAAGATGTTACTTCACTGGACTGGAATTG
TGATGGAACACTATTAGCCACCGGTTCTTATGATGGCTATGCACGATTATGGGCCACCAA
TGGACGCCTTGAGAATGTACTTGGCCAACATAAAGGTCCCATCTTCGCATTGAAATGGAA
CAAAAAAGGAAATTACATACTAAGTGCAGGTGTGGACAAAACCACCATTATATGGGATGC
TACTACTGGAGAGGCAAAGCAACAGTTTCCATTTCATCAAGCACCTGCCCTTGATGTGGA
CTGGCAAAACAATACTTGCTTTGCATCGTGCTCCACCGATATGAGTATTCATGTGTGTAG
ATTGGGACTGGATAGACCTGTAAAAACTTTCGATGGCCATTCAAATGAAGTAAACGCCAT
AAAATGGGATCCGTCGGGCAGCCTTCTTGCCTCGTGTTCAGATGACATGACGTTAAAGGT
GTGGTCGATGAACCAAGACAGCTTCGTGCATGACTTAAGAGCACACAGTAAAGAAATCTA
CACAATAAAATGGAGTCCTGCTGGCCCAGGATCAAATAACCCAAACCAGAACCTTATGTT
GGCAAGTGCCTCTTTCGATTCCACTGTTCGTTTATGGGAGTTGGAAAAAGGAGCATGCCT
TCATACTTTGACAAAGCACCATGAACCAGTTTATTCGGTGGCATTTAGTCCTGATGGTCG
GTTGCTTGCCAGTGGTTCATTTGATAAGTGCGTTCACATCTGGAGTACTCAGACGGGCAA
ATTAGTTCACAGTTACGAAGGCACTGGTGGAATATTTGAAGTTTGTTGGAATTCAAGTGG
AAATAAAGTGGGAGCAAGTGCATCTGATGGGACGGTAAAT
| ProSiteProfiles |
LisH (IPR006594) - T[10-42] 10.537 |
| SMART |
LisH (IPR006594) - T[10-42] 6.1E-6 |
| Pfam |
LisH (IPR006594) - T[12-38] 5.3E-9 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[178-541] 5.3E-157 |
| SMART |
WD40_repeat (IPR001680) - T[184-223] 6.7E-8 - T[241-286] 2.4E-4 - T[288-327] 3.5E-7 - T[330-368] 0.022 - T[371-410] 2.3E-11 - T[413-461] 1.3E-7 - T[464-503] 3.4E-12 - T[506-541] 41.0 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[186-540] 4.07E-77 |
| Pfam |
WD40_repeat (IPR001680) - T[188-223] 2.8E-5 - T[258-285] 8.8E-5 - T[293-327] 0.0012 - T[373-410] 8.1E-10 - T[417-460] 0.0012 - T[465-503] 6.1E-10 - T[507-540] 0.15 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[191-225] 13.884 - T[261-285] 10.107 - T[295-336] 13.416 - T[378-419] 16.223 - T[420-470] 11.678 - T[471-512] 16.657 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[191-512] 52.756 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[210-224] . - T[314-328] . - T[448-462] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[210-224] 9.5E-7 - T[397-411] 9.5E-7 - T[448-462] 9.5E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBL1R_HUMAN | 70.149 % | 768 | 0 |
| TBL1X_HUMAN | 68.306 % | 762 | 0 |
| TBL1Y_HUMAN | 68.498 % | 751 | 0 |