- Transcript 'Moocci.CG.ELv1_2.S43...' >
- Transcript 'KH2012:KH.C5.42.v2.A...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Cisavi.CG.ENS81.R30....' >
- Transcript 'Cisavi.CG.ENS81.R88....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R88.257071-262109.08976.t
Possible name(s)
RPS4X; RPS4Y1; RPS4Y2
Gene model
Location
R88 [257,070 / 262,109]
Amino acid sequence
Length: 259
>Cisavi.CG.ENS81.R88.257071-262109.08976.p
MARGPKKHLKRLAAPKHWMLDKLTGVQAPRPSTGPHKLRECLPLCIFLRNRLHYALTFDE
TKRILMQRLVKVDGKVRTDTTYPAGFMDVITLDKTAENFRLIYDVKGRFAVHRITADEAK
YKLCKVKKLATAPKGIPFLVTHDARTIRYPNPDIKVHDTVVVDIASGKITGFVHLDSGNM
CMITGGHNLGRVGTVMHRERHPGSFDIIHVKDALGHTFATRLSNVFIIGQANKPMVSLPR
GKGIKLTIAEERDRRLATK
Nucleotide sequence
Length: 868
>Cisavi.CG.ENS81.R88.257071-262109.08976.t
CTGTTGTCTATGTGATTTTGCCGAAATTAATTCTTTTTACGAATCAATATGGCGCGTGGA
CCAAAAAAGCATCTGAAGCGCTTAGCCGCCCCCAAGCATTGGATGCTGGACAAACTTACT
GGTGTTCAGGCCCCCAGACCATCCACTGGTCCCCACAAATTGAGGGAATGTCTTCCTCTG
TGCATTTTCCTACGTAACCGTCTGCATTATGCCCTGACGTTCGATGAAACCAAGCGGATT
CTCATGCAACGTCTGGTGAAGGTTGATGGGAAGGTACGAACCGATACAACCTACCCGGCT
GGCTTCATGGATGTGATCACACTTGATAAGACTGCTGAGAACTTCAGGTTGATCTACGAT
GTCAAAGGTCGATTTGCGGTTCACAGAATCACTGCAGATGAGGCAAAGTACAAGCTTTGC
AAAGTGAAGAAGTTGGCAACAGCTCCCAAGGGGATTCCCTTCCTGGTGACCCACGATGCT
CGTACGATCCGATACCCCAACCCCGATATCAAGGTCCACGATACTGTGGTGGTTGATATC
GCGAGCGGGAAAATCACTGGCTTCGTTCACCTTGACAGTGGCAACATGTGCATGATAACT
GGAGGTCACAACTTGGGAAGAGTTGGCACAGTGATGCATAGAGAACGTCATCCAGGGTCG
TTCGATATTATCCACGTGAAAGATGCTCTCGGACATACTTTTGCCACTCGTCTATCCAAC
GTATTCATCATTGGACAGGCAAACAAACCGATGGTTTCACTTCCAAGGGGCAAAGGAATC
AAACTCACCATAGCCGAGGAAAGAGATCGACGCTTGGCCACCAAATAAGCGAATGTGTCG
AGGTTAAATAAAAAATTGAAATCTATCA
| PANTHER |
Ribosomal_S4e (IPR000876) - T[1-259] 3.6E-143 |
| PIRSF |
Ribosomal_S4e (IPR000876) - T[1-241] 3.7E-93 |
| Pfam |
Ribosomal_S4e_N (IPR013843) - T[3-39] 8.2E-20 |
| Hamap |
Ribosomal_S4e (IPR000876) - T[7-238] 34.588 |
| ProSitePatterns |
Ribosomal_S4e_N_CS (IPR018199) - T[8-22] . |
| ProSiteProfiles |
S4_RNA-bd (IPR002942) - T[42-105] 9.705 |
| Pfam |
S4_RNA-bd (IPR002942) - T[46-90] 2.1E-5 |
| CDD |
S4_RNA-bd (IPR002942) - T[62-112] 0.00113126 |
| ProDom |
Ribosomal_S4e_central_region (IPR013845) - T[87-181] 3.0E-36 |
| Pfam |
Ribosomal_S4e_central_region (IPR013845) - T[95-169] 5.0E-36 |
| Gene3D |
Ribosomal_S4e_central_sf (IPR038237) - T[122-171] 2.0E-25 |
| Gene3D |
Rib_L2_dom2 (IPR014722) - T[175-245] 6.3E-36 |
| Pfam |
KOW (IPR005824) - T[178-211] 2.4E-5 |
| Pfam |
40S_S4_C (IPR032277) - T[212-259] 8.5E-28 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RS4X_HUMAN | 76.448 % | 428 | 9.23E-154 |
| RS4Y1_HUMAN | 74.517 % | 421 | 3.62E-151 |
| RS4Y2_HUMAN | 72.201 % | 406 | 5.82E-145 |