Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R79.429759-434547.07237.t

Possible name(s)

DDC; GAD1; HDC

Gene model

Cisavi.CG.ENS81.R79.429759-434547

Location

R79 [429,770 / 434,547]

Sequences

Amino acid sequence

Length: 478

>Cisavi.CG.ENS81.R79.429759-434547.07237.p
TKSPRKGIEPETFRNAATTMIDYVIKYHKEIGNRQAFPDVEPGFMRDLLPSDAPKAGESW
EDVYSDIERVVMRGMTHWNAPGFFAYFPTASSFPGLLADILCGGATCIGFSWVASPSCTE
METVMMDWLAKALDLPQCFIHGGHGPGGGVIQGTASESTLITLIAARSKVIRRELSRDPN
LSMYDVLSRMVVYTSNCSHSSVEKAGLLAMIEVRKLDAGREGIVTGKTLQEAIDEDKKNN
KIPTFVCATLGTTSCCSYDNVDEIGRICEIEDIWLHIDAAYAGAALICPEFRHIANGIQR
ATSFNFNPHKWLMVNFDCSALCSYLSNSANVDALYLEHETQQTTIDYRHWQIPLGRRYRS
LKVWFVLRMVGIDGLQSHIRRGVAEAKYFESLVRKDERFEIVFPVTLGLVCLKLKRLGLN
LEENVINEELNRKIQDDRRIHLVPSTVHGIYFLRVATGSVNCSRQALDNCWDVIREMA

Nucleotide sequence

Length: 1,434

>Cisavi.CG.ENS81.R79.429759-434547.07237.t
ACAAAATCACCTCGGAAGGGAATTGAACCAGAAACCTTCCGCAATGCGGCGACAACGATG
ATCGATTACGTCATCAAGTATCACAAGGAGATCGGAAATCGGCAAGCATTTCCGGATGTA
GAACCCGGGTTCATGAGAGATTTGCTGCCATCGGATGCCCCGAAAGCGGGAGAGTCGTGG
GAAGATGTATATAGCGACATCGAGCGGGTAGTAATGAGAGGGATGACACATTGGAACGCT
CCAGGGTTTTTCGCGTATTTTCCAACGGCCAGCAGCTTTCCTGGATTGCTCGCTGACATT
CTATGCGGAGGGGCAACTTGCATCGGGTTCTCATGGGTGGCGTCGCCATCTTGCACGGAG
ATGGAAACTGTGATGATGGACTGGCTCGCTAAAGCACTTGATCTTCCTCAATGTTTCATT
CACGGTGGACACGGCCCAGGAGGTGGAGTCATCCAAGGTACAGCAAGCGAATCGACGTTA
ATAACGCTCATTGCTGCCAGAAGCAAAGTGATTCGTCGAGAGCTATCACGTGATCCGAAC
TTATCAATGTATGACGTCCTGTCAAGAATGGTCGTTTATACGTCCAACTGTAGCCATTCA
AGCGTGGAGAAAGCAGGTTTATTAGCAATGATCGAAGTGAGGAAATTGGACGCGGGACGT
GAGGGGATTGTTACAGGAAAGACACTGCAGGAGGCAATCGATGAAGACAAGAAAAACAAT
AAAATCCCAACATTTGTGTGCGCTACTCTAGGTACGACTTCATGCTGTTCATACGACAAT
GTGGACGAAATCGGGAGAATATGTGAGATCGAGGATATTTGGCTACATATTGATGCCGCC
TATGCAGGAGCTGCACTGATTTGCCCTGAATTTCGCCATATCGCTAATGGAATACAGAGA
GCTACCTCTTTTAACTTTAACCCGCATAAATGGCTGATGGTGAACTTTGACTGCTCAGCG
TTATGCAGCTACCTCAGCAACTCGGCCAACGTGGATGCGCTTTACTTGGAGCACGAAACG
CAACAGACGACCATCGATTATAGGCACTGGCAGATACCGCTCGGTCGAAGGTACCGGTCG
CTAAAAGTCTGGTTCGTTTTACGCATGGTGGGTATAGATGGCCTTCAATCACACATACGT
CGGGGTGTGGCCGAAGCAAAGTATTTCGAAAGTTTAGTTAGAAAGGACGAAAGATTTGAG
ATCGTGTTCCCAGTTACCTTGGGCCTAGTGTGCTTGAAATTGAAACGTCTAGGATTAAAT
CTTGAGGAGAACGTGATCAACGAAGAACTCAACCGGAAAATCCAGGATGATCGGCGAATC
CACTTGGTTCCATCAACTGTTCATGGAATCTATTTCCTTCGGGTTGCAACAGGGTCAGTC
AACTGCAGCCGTCAAGCGCTGGATAATTGCTGGGACGTAATCCGCGAGATGGCG

InterProScan

SUPERFAMILY	PyrdxlP-dep_Trfase (IPR015424) - T[9-478] 9.5E-128
PRINTS	Aromatic_deC (IPR010977) - T[13-32] 2.1E-75 - T[36-53] 2.1E-75 - T[54-73] 2.1E-75 - T[80-99] 2.1E-75 - T[101-119] 2.1E-75 - T[120-139] 2.1E-75 - T[147-167] 2.1E-75 - T[353-368] 2.1E-75 - T[396-415] 2.1E-75
Pfam	PyrdxlP-dep_de-COase (IPR002129) - T[42-415] 7.1E-132
Gene3D	PyrdxlP-dep_Trfase_major (IPR015421) - T[89-380] 1.9E-102
Gene3D	PyrdxlP-dep_Trfase_dom1 (IPR015422) - T[381-478] 1.2E-25

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
DDC_HUMAN	51.059 %	521	0
DCHS_HUMAN	44.885 %	441	1.61E-149
DCE1_HUMAN	28.108 %	136	1.4E-34