- Transcript 'Cisavi.CG.ENS81.R77....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R77.2824915-2843851.13717.t
Possible name(s)
ADGRB2; ADGRB3; HMCN1
Gene model
Location
R77 [2,839,110 / 2,843,851]
Amino acid sequence
Length: 805
>Cisavi.CG.ENS81.R77.2824915-2843851.13717.p
MKLFLVSSVLVILAVGYADSSNCNIGQFTGFNQADPGPFVACLKDPCSVDSEDVALVNCT
LHSHCALHNSQCYAKQRASPPVDSQQAFFELIASQINAGAAINTTDEDARLFPIGGQGGF
PPQGGLPPIGGFPTAPTIPGCNSPVPSPYPNLGGLAGLGGLAGLGGVGGLGGVGGLGGVG
GIGGLGGLGGQGGVGGYGGLGSFPTICPSSFPATCGINAQSNLLQLLEPPVNVPYCQRIP
CSSSNPCLESNRFSCMSVPGCYFDLGLANLRQRYGNHIMPGVPVCHLAIRNRKFHTIASN
YVQRSGRQWNGIYTRCLLNENRNEVFSPAAGCYQINVLKYIGVYPKIAGWPGITTQECYL
IDGCPIDGGCYHPGDLSRVQVRSGEDATRRNVQTGYNYYGQPMCMNYNPTTPQQYLTGYH
QCRQAGCVVDPSISNQLIRQQFYQLATTLPLLHQRPFWNGVLNNDIRPDNYQQHLTPNAC
PNLGSNPTTGAYSLNLAGRKKRNVNNQAILAALGLAGIGGPSVGGGINGGVTGFPTPVPQ
CPYQTYNGQLTGSTAGCCQRNYCYTPRSTILRSASGIATYQGNWGEYEACSVSCGGGTRK
RTRPCIRYHANDTCEHESEQIHRCNVAPCPNFGPWTPYGQCSSTCGAGTQTRSRPCLPAG
STCADDNQGGATQSQPCNNGACPVYSNWSPYGACDAVCGVGQQTRSRTCTAASGGAPCTL
PLVDTKSCAVSCGSCQDVRGSCQRYNKCYRVITTQCVPDASGGAYCPDCVTPTTRKERCT
PQSPQGNDFYCGYCDHPQVPCAPLV
Nucleotide sequence
Length: 2,418
>Cisavi.CG.ENS81.R77.2824915-2843851.13717.t
ATGAAGTTGTTTCTTGTATCAAGCGTTCTCGTGATCTTGGCTGTTGGGTATGCAGACAGC
TCGAATTGTAACATCGGTCAATTCACCGGTTTCAATCAAGCCGATCCCGGTCCATTTGTG
GCCTGTTTGAAGGACCCGTGCTCTGTTGATAGCGAAGACGTGGCTTTAGTTAACTGCACT
TTGCATTCACACTGTGCTTTGCACAACAGCCAGTGCTACGCTAAACAAAGAGCGTCACCA
CCAGTCGATTCGCAACAGGCATTTTTCGAGCTTATTGCCAGCCAAATCAATGCTGGCGCA
GCTATAAATACAACGGATGAAGATGCCCGGCTATTTCCAATTGGTGGACAAGGCGGGTTT
CCACCTCAAGGAGGTTTGCCACCCATTGGAGGGTTCCCAACAGCACCAACTATTCCCGGT
TGCAACAGCCCAGTGCCTTCCCCGTATCCAAATCTTGGCGGCCTAGCAGGCCTTGGGGGC
CTTGCCGGTCTTGGCGGAGTTGGCGGTCTTGGTGGAGTTGGCGGCCTTGGTGGAGTTGGT
GGCATTGGCGGTCTTGGCGGCCTTGGTGGCCAGGGAGGTGTGGGTGGCTACGGAGGTCTT
GGTTCGTTTCCAACGATCTGTCCATCCTCCTTCCCTGCAACCTGCGGCATCAACGCGCAA
TCCAACTTACTTCAACTCTTAGAGCCCCCGGTCAATGTTCCTTATTGTCAAAGGATTCCA
TGCTCTTCCAGCAACCCATGTTTGGAAAGCAACAGATTTTCCTGCATGAGCGTCCCTGGC
TGTTACTTTGACCTTGGACTTGCCAATCTTCGGCAACGATACGGGAACCATATTATGCCA
GGAGTGCCAGTCTGCCATCTTGCGATCAGAAACCGAAAGTTTCACACAATAGCAAGCAAT
TACGTTCAAAGGAGCGGCCGTCAGTGGAACGGGATTTACACTCGATGCTTGCTTAATGAA
AACCGCAATGAAGTCTTTTCACCCGCTGCAGGCTGTTACCAAATCAACGTACTCAAATAT
ATTGGTGTCTATCCCAAAATCGCTGGGTGGCCAGGTATTACAACCCAGGAATGTTATCTG
ATCGATGGTTGTCCGATAGACGGCGGTTGTTATCACCCTGGCGATCTCAGTAGAGTGCAA
GTTCGCTCCGGTGAAGATGCCACTCGGCGAAACGTGCAAACCGGCTACAACTACTACGGC
CAACCAATGTGCATGAACTACAACCCAACCACCCCTCAGCAATACTTGACCGGTTACCAT
CAGTGCCGCCAAGCTGGATGTGTTGTAGATCCAAGCATTTCAAATCAACTTATACGTCAG
CAGTTTTACCAGCTCGCAACTACATTACCACTTCTTCATCAGCGACCTTTCTGGAATGGA
GTTCTAAACAATGACATTAGGCCAGACAACTATCAACAACATTTGACACCAAATGCTTGT
CCTAACTTGGGTTCCAATCCTACAACTGGTGCATATTCTCTAAATCTAGCTGGAAGAAAG
AAGAGAAATGTTAATAATCAAGCTATATTAGCGGCTCTTGGATTGGCCGGCATCGGAGGA
CCTAGCGTAGGTGGCGGAATCAATGGTGGAGTTACGGGATTCCCAACACCAGTCCCACAG
TGCCCGTACCAGACATATAACGGACAACTGACCGGTAGTACGGCAGGATGTTGCCAGAGA
AACTACTGCTACACACCCAGATCAACTATTTTAAGGTCTGCATCAGGCATTGCTACTTAC
CAAGGTAATTGGGGAGAATACGAAGCTTGCTCTGTGAGCTGCGGGGGTGGTACAAGGAAG
CGAACAAGGCCTTGTATTAGATATCACGCAAACGACACCTGTGAGCACGAGTCTGAGCAA
ATTCACAGATGCAACGTGGCCCCTTGCCCTAACTTTGGTCCTTGGACTCCTTATGGACAG
TGCTCTTCTACATGTGGGGCTGGAACTCAGACCAGATCTCGGCCTTGCCTTCCAGCTGGC
AGCACTTGTGCTGACGATAATCAGGGTGGAGCTACGCAATCTCAACCTTGTAACAACGGG
GCGTGTCCGGTGTACTCAAATTGGAGCCCATATGGTGCTTGTGATGCTGTATGTGGGGTT
GGTCAGCAAACTAGGAGTAGAACATGCACAGCAGCTAGCGGAGGCGCCCCCTGCACTCTC
CCATTAGTCGACACCAAATCGTGTGCGGTATCGTGTGGATCGTGCCAAGATGTCCGCGGT
TCTTGTCAAAGATATAACAAATGCTACAGGGTAATCACAACTCAGTGTGTGCCAGACGCA
AGCGGAGGTGCTTATTGTCCAGACTGCGTAACGCCGACCACAAGAAAGGAGCGTTGTACG
CCTCAAAGTCCACAAGGAAATGATTTTTATTGTGGATATTGCGATCACCCTCAAGTTCCC
TGTGCTCCCCTTGTTTAA
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[578-627] 4.0E-11 - T[628-683] 1.0E-10 - T[684-729] 3.6E-10 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[578-628] 10.148 - T[629-683] 12.033 - T[685-733] 9.88 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[580-629] 3.01E-10 - T[629-678] 2.62E-8 - T[682-729] 2.35E-10 |
| SMART |
TSP1_rpt (IPR000884) - T[581-630] 2.4E-8 - T[632-683] 9.5E-10 - T[685-733] 1.1E-6 |
| Pfam |
TSP1_rpt (IPR000884) - T[582-629] 5.8E-9 - T[633-682] 2.6E-7 - T[686-730] 1.0E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 40.141 % | 95.5 | 8.06E-20 |
| AGRB2_HUMAN | 35.323 % | 97.8 | 1.19E-20 |
| AGRB3_HUMAN | 37.58 % | 97.1 | 1.92E-20 |
