- Transcript 'Cisavi.CG.ENS81.R77....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R77.2824915-2843851.13712.t
Possible name(s)
ADGRB2; ADGRB3; HMCN1
Gene model
Location
R77 [2,824,914 / 2,831,738]
Amino acid sequence
Length: 388
>Cisavi.CG.ENS81.R77.2824915-2843851.13712.p
HQRPFWNGVLNNQIRPDNYQQHLTPSACPNVGSNPSPSLLPFSLNLSGRKKRNVNLGFGP
GIFPTPVPQPDNYQQHLTPSACPNVGSNPSPSLLPFSLNLSGRKKRNVNLGFGPGIFPTP
VPQCPYQTYNGQLTGSTAGCCQRNYCYTPRSTILRSASGIATYQGNWGEYEACSVSCGGG
TRKRTRPCIRYHANDTCEHESEQIHRCNVDACPNFGSWTPYGQCSSTCGAGTRTRSRPCL
PAGSTCADDNQGGATQSQPCNNGACPVYSNWSPYGACNAVCGVGQQTRSRTCTAASGGAP
CSLPLVDTKSCAVSCGSCQDVPGPCQRYNKCYRVITTQCVPDASGGAYCPDCVTPTTRKE
RCVPQSPQGNDFLCGYCAHPQVPCAPLV
Nucleotide sequence
Length: 1,167
>Cisavi.CG.ENS81.R77.2824915-2843851.13712.t
CATCAGCGACCTTTCTGGAATGGAGTTTTAAACAACCAGATTAGGCCAGACAACTATCAA
CAACACTTAACACCGAGCGCTTGTCCTAACGTTGGTTCCAACCCATCACCTTCCCTCCTT
CCATTTTCACTGAATCTATCTGGAAGAAAGAAAAGGAATGTTAACCTAGGCTTTGGGCCG
GGGATCTTTCCAACACCAGTCCCACAGCCAGACAACTATCAACAACACTTAACACCGAGC
GCTTGTCCTAACGTTGGTTCCAATCCATCACCTTCCCTCCTTCCATTTTCACTGAATCTA
TCTGGAAGAAAGAAAAGGAATGTTAACCTAGGCTTTGGGCCGGGGATCTTTCCAACACCA
GTCCCACAGTGTCCGTACCAGACATATAACGGACAACTGACCGGTAGTACGGCAGGATGT
TGCCAGAGAAACTACTGCTACACACCCAGATCAACCATTTTAAGGTCTGCATCAGGCATC
GCCACTTACCAAGGTAATTGGGGGGAATACGAAGCTTGCTCTGTGAGCTGCGGGGGTGGC
ACAAGAAAGCGAACAAGGCCTTGTATTAGATATCACGCAAACGACACCTGTGAGCACGAG
TCCGAGCAAATTCACAGATGTAACGTGGACGCTTGCCCTAACTTTGGTTCTTGGACTCCG
TATGGACAGTGCTCTTCTACGTGTGGGGCTGGAACTCGGACCAGATCTCGACCTTGCCTT
CCAGCTGGCAGCACTTGTGCTGACGACAATCAGGGCGGAGCTACGCAATCTCAACCTTGC
AACAACGGGGCGTGTCCGGTGTACTCAAATTGGAGCCCATATGGTGCATGTAATGCTGTA
TGTGGGGTTGGTCAGCAAACTAGGAGTAGAACATGCACAGCAGCTAGCGGAGGCGCCCCC
TGCTCTCTCCCATTAGTCGACACCAAATCGTGTGCGGTATCGTGTGGATCGTGTCAAGAC
GTCCCCGGTCCTTGTCAAAGATATAACAAATGCTACAGGGTAATCACAACTCAGTGTGTG
CCAGACGCGAGCGGAGGTGCTTATTGTCCCGACTGCGTAACGCCGACCACAAGGAAGGAG
CGTTGTGTACCTCAAAGTCCACAAGGAAATGATTTTCTTTGTGGATATTGCGCTCATCCT
CAAGTTCCCTGTGCTCCTCTTGTTTAA
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[161-211] 9.951 - T[212-266] 11.871 - T[268-316] 9.825 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[161-209] 1.5E-11 - T[210-266] 1.6E-10 - T[267-312] 1.6E-10 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[163-212] 1.57E-10 - T[215-265] 3.27E-8 - T[265-312] 1.14E-10 |
| SMART |
TSP1_rpt (IPR000884) - T[164-213] 1.1E-8 - T[215-266] 2.5E-9 - T[268-316] 2.9E-6 |
| Pfam |
TSP1_rpt (IPR000884) - T[165-212] 2.8E-9 - T[217-265] 5.8E-7 - T[269-313] 1.6E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 38.312 % | 90.1 | 2.66E-19 |
| AGRB2_HUMAN | 34.826 % | 90.9 | 1.47E-19 |
| AGRB3_HUMAN | 38.217 % | 93.2 | 2.46E-20 |
