- Transcript 'KH2012:KH.C8.512.v4....' >
- Transcript 'Cisavi.CG.ENS81.R17....' >
- Transcript 'KH2012:KH.C4.411.v1....' >
- Transcript 'KH2012:KH.C12.129.v1...' >
- Transcript 'Cisavi.CG.ENS81.R77....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R77.1735956-1747597.07805.t
Possible name(s)
ADGRB2; HMCN1; THBS1
Gene model
Location
R77 [1,735,955 / 1,744,213]
Amino acid sequence
Length: 409
>Cisavi.CG.ENS81.R77.1735956-1747597.07805.p
MYIPGFILILAVSVFGQLQDIPVEKCKCWVPTYNRVACNQYNPNIPQGQCESMGCCYHDS
GLYTTPKCYRMTGRCPPQQCLIPASQRTVCITANLASTRCLNGQCCYDGGSAPHCYQSIG
RQPVPRYDTSVRRSMFSDGGGENIPHMPKGYLRQGNAMLIVGGCERATMPCGTTKTTKEQ
CMRFMCCWMPSRKTPSGQTCFTSIYNFIKFPFAKWNNWGNWEACSTTTPCVTGTQNRRRT
CENQKVNGPGCQGSDVESRSCTTCTVSWGAWTAYGACVSSETLCASGTQTRTRQCQNSAA
VVQPSSSCTGVDTENQVCNANLCPTYTPWSGACSVTCGGGTQNRARTCTTTPAGPIPASC
TAETGVACNTQSCNKDLDIMFIVDSSDQLDLCSTKESALSIIAPFASTN
Nucleotide sequence
Length: 1,273
>Cisavi.CG.ENS81.R77.1735956-1747597.07805.t
TTAGGAAGTTAAGGCATTGAAATATTGTGCTCACCAAGCTTCAAAGATGTACATTCCCGG
GTTCATCCTAATTCTGGCTGTTTCAGTCTTCGGGCAATTGCAGGATATTCCTGTCGAAAA
GTGTAAGTGCTGGGTGCCAACTTACAATCGAGTCGCTTGCAATCAATACAACCCAAATAT
ACCGCAAGGACAGTGCGAATCAATGGGCTGTTGCTACCACGACAGTGGACTATACACTAC
GCCAAAGTGCTACAGAATGACAGGACGATGCCCGCCTCAGCAGTGCCTCATTCCTGCCTC
CCAGCGGACGGTTTGCATTACAGCTAACCTTGCGTCAACCAGATGTCTGAACGGCCAATG
TTGTTATGACGGTGGTTCCGCCCCACACTGCTACCAATCAATTGGTCGTCAGCCTGTCCC
AAGGTACGACACCAGCGTTCGCCGCTCTATGTTTTCAGACGGTGGCGGCGAGAACATACC
CCACATGCCAAAGGGCTACCTGAGGCAAGGAAATGCTATGCTGATAGTGGGCGGATGCGA
AAGGGCAACCATGCCTTGTGGAACTACAAAAACTACAAAGGAACAGTGTATGCGATTCAT
GTGTTGCTGGATGCCAAGTAGAAAAACGCCATCTGGACAGACTTGTTTCACCAGTATCTA
TAATTTCATCAAATTCCCTTTCGCTAAGTGGAATAACTGGGGGAACTGGGAAGCTTGTTC
GACGACTACACCTTGTGTAACCGGGACACAAAACAGAAGACGAACATGTGAAAATCAAAA
GGTTAACGGACCTGGTTGCCAAGGAAGTGACGTAGAAAGCAGGTCCTGCACTACATGTAC
CGTCTCTTGGGGTGCCTGGACCGCTTATGGCGCGTGCGTGTCATCTGAAACACTCTGTGC
CTCCGGAACCCAAACCAGGACGAGACAATGTCAAAACTCTGCCGCAGTTGTTCAGCCATC
GTCAAGCTGCACTGGTGTGGATACGGAGAATCAAGTATGCAACGCGAATCTGTGCCCAAC
GTACACTCCGTGGTCTGGCGCATGCAGTGTTACTTGTGGAGGTGGCACCCAAAACCGTGC
ACGTACTTGCACGACGACGCCCGCAGGACCCATCCCAGCGTCATGCACAGCTGAGACCGG
CGTGGCTTGTAACACACAGAGCTGCAACAAGGATCTCGACATTATGTTCATTGTGGATTC
ATCTGACCAGCTTGACTTATGCTCCACCAAAGAATCAGCTTTATCAATAATAGCACCATT
TGCCTCTACCAAT
| ProSiteProfiles |
P_trefoil_dom (IPR000519) - T[24-72] 12.103 - T[78-119] 9.911 |
| Pfam |
P_trefoil_dom (IPR000519) - T[28-69] 4.1E-8 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[212-262] 9.316 - T[265-324] 9.67 - T[327-374] 8.572 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[213-264] 2.3E-7 - T[266-323] 1.3E-7 - T[325-373] 1.1E-6 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[214-262] 7.85E-7 - T[267-323] 5.62E-6 - T[326-373] 2.22E-5 |
| SMART |
TSP1_rpt (IPR000884) - T[215-265] 0.044 - T[268-324] 0.0016 - T[326-374] 1.7E-4 |
| Pfam |
TSP1_rpt (IPR000884) - T[217-262] 3.5E-5 - T[270-323] 4.3E-4 - T[327-373] 9.2E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 40.26 % | 90.1 | 3.27E-19 |