- Transcript 'Cisavi.CG.ENS81.R7.2...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R7.2405834-2430809.12764.t
Possible name(s)
FARP1; FARP2; FRMD7
Gene model
Location
R7 [2,415,907 / 2,430,809]
Amino acid sequence
Length: 810
>Cisavi.CG.ENS81.R7.2405834-2430809.12764.p
DIVRRLEQYGLRLLPAKDQENTDIKLAVAHMGVLVFRGNAKINTFNWARIRKLSFKKKRF
LIKLRTETSVDNVGDILVFVMASRDTCKNFWRHCIEYHAFFRLDLHPAPAPKPKIIKRGS
TFRYSGKTQKQLHDLVRNSNFRRTTFARKSARTPTIHSRPTPYAPAVAVTPAANEFVING
YAAKTPGVQPCQQSEQIKCCQVQFHQPLPPFPPPPPVDSDDDVSDTFPSPPPLPPKSAKT
TPAPVQSEVSIPGMGGGEPRTPSQYAALEQKMIKAGFYSVPTHSDESEENYSDNADTRER
SYPSSQAYYIAKEILTTERTYVKDLEVITKWFKSALQKESSDFLLPENLANQLFGGIGSL
VALHQQFLCTLDDRLSSWEGRGSTGASNDQLVDDLMLNHMLVLKKYLGSLENGESLILAL
EETGEDSRFESIYREFELQKVCYLPFNSFLLKPMQRVVHYKLVVERECMHDDSSMDNHSD
LQTAYQEATALATAIQERLKRAHNLQKLAQLRRDLLGVDNLIKAKRDFIREGSLYKLSRK
GFQQRLFFLFSDCLVYTSKGVTSTNQFKVHAELPLQGMIIEVNEGESAVPNCFSILSGTK
TVIVAAATQEEMDKWLEDFSVAIALAGRDTTLFDSPLNNTTGSMSRLSMEQSSEDGEGSV
RNSMERLKPPMQHRSNATMHVCWHRNTSVSSSDHLVSLRNQLSGYLLRKFKNSNGWQKLW
VVFTNFCLFFYKSHQDESPLASLPLLGYTINSPSENDGIRKDFVFKLKFKTHVYFFRAES
QFTYNRWLEVVSSATVTSQRTRLFSRMDSY
Nucleotide sequence
Length: 2,815
>Cisavi.CG.ENS81.R7.2405834-2430809.12764.t
GACATCGTGCGGCGCCTCGAGCAGTACGGACTGCGGTTGCTCCCTGCCAAGGACCAGGAG
AACACCGATATAAAACTCGCGGTGGCTCACATGGGAGTTCTGGTGTTCCGGGGCAATGCG
AAGATAAACACGTTTAACTGGGCTCGAATACGCAAGCTCAGCTTTAAAAAGAAAAGGTTC
CTGATCAAACTAAGGACGGAAACAAGCGTTGATAATGTCGGTGACATCTTAGTTTTCGTC
ATGGCTTCAAGGGACACATGTAAAAACTTCTGGAGACATTGCATAGAGTACCACGCATTT
TTCAGACTCGACCTTCACCCAGCACCAGCACCCAAACCAAAGATCATTAAGCGTGGTTCA
ACGTTCAGATATAGCGGGAAAACTCAGAAGCAACTTCATGATTTGGTTCGAAACAGCAAC
TTCCGTCGAACCACTTTTGCACGAAAGTCTGCCCGGACTCCCACTATTCACAGCAGGCCA
ACTCCATATGCCCCAGCTGTAGCCGTAACCCCTGCGGCCAATGAATTTGTAATAAATGGT
TACGCCGCAAAGACGCCAGGTGTACAGCCCTGCCAGCAGAGCGAGCAAATCAAGTGTTGC
CAGGTCCAGTTCCACCAGCCGTTACCCCCTTTCCCCCCACCCCCGCCAGTGGATTCAGAT
GATGATGTAAGCGACACTTTTCCTTCCCCACCCCCCTTGCCCCCGAAATCAGCAAAAACT
ACCCCAGCTCCAGTTCAGAGTGAAGTAAGCATCCCTGGCATGGGGGGTGGGGAACCACGG
ACCCCCAGTCAGTATGCGGCTCTGGAGCAGAAAATGATCAAAGCTGGGTTCTACTCAGTT
CCGACCCATTCGGACGAAAGCGAAGAAAACTATAGTGATAATGCCGATACCCGAGAAAGA
TCATATCCATCCTCACAAGCCTACTACATTGCCAAGGAAATCCTGACAACTGAACGAACT
TATGTGAAAGATTTAGAAGTCATAACCAAGTGGTTTAAATCAGCGCTGCAGAAGGAGAGC
TCTGACTTCCTCCTCCCAGAGAACCTCGCCAATCAGCTCTTCGGCGGGATCGGATCGCTC
GTCGCTCTTCATCAGCAGTTCCTCTGCACACTGGATGATCGGTTGTCCTCCTGGGAGGGT
AGGGGGAGCACAGGGGCGTCCAATGATCAACTCGTAGATGACCTCATGCTTAACCACATG
CTTGTGTTGAAGAAATACCTGGGATCGCTTGAAAATGGGGAATCGTTGATTCTTGCGCTT
GAAGAAACTGGTGAAGATTCGAGGTTTGAGTCCATCTATCGGGAGTTTGAGCTGCAGAAG
GTGTGCTACCTCCCGTTCAACTCATTCCTGCTCAAACCGATGCAGAGAGTCGTGCATTAT
AAGCTCGTCGTGGAGCGTGAGTGTATGCATGATGATTCAAGTATGGACAACCACTCCGAC
CTACAAACCGCATACCAGGAAGCAACTGCTCTCGCTACTGCCATCCAGGAGAGACTCAAA
CGAGCTCACAACCTCCAGAAGTTGGCGCAACTGAGACGCGACCTTCTAGGGGTGGACAAC
TTGATAAAAGCTAAAAGAGACTTCATACGAGAAGGCAGCTTGTACAAGTTATCGAGGAAG
GGCTTCCAACAGCGGTTATTCTTCTTGTTCTCTGATTGCCTCGTCTACACAAGCAAAGGG
GTCACGTCGACCAACCAGTTCAAAGTTCACGCCGAACTTCCCCTGCAAGGGATGATCATT
GAAGTGAACGAGGGTGAGAGTGCCGTCCCGAACTGCTTCAGCATCTTGTCGGGCACGAAG
ACGGTGATTGTGGCTGCTGCCACCCAGGAGGAGATGGACAAGTGGTTGGAGGATTTCAGC
GTCGCAATCGCACTTGCTGGTCGTGATACCACACTCTTCGATTCCCCGCTCAATAACACT
ACAGGATCAATGAGTCGACTCTCCATGGAGCAGTCGTCGGAGGATGGGGAGGGGTCGGTG
CGCAACTCGATGGAGCGACTCAAACCTCCGATGCAGCATCGATCCAACGCCACTATGCAC
GTCTGCTGGCACCGGAACACCAGCGTCAGCTCCTCCGACCACTTGGTGTCGCTAAGGAAC
CAGCTAAGCGGCTATTTGCTGCGGAAATTTAAGAACTCCAACGGCTGGCAGAAGCTTTGG
GTTGTCTTCACCAATTTCTGTCTCTTCTTTTACAAATCGCACCAGGACGAATCGCCGTTA
GCAAGTCTTCCACTACTCGGCTACACCATCAACTCCCCGTCCGAGAACGACGGAATAAGA
AAGGACTTTGTGTTCAAGCTCAAGTTCAAAACTCACGTATATTTCTTCAGGGCCGAGAGC
CAGTTCACTTACAACAGATGGCTGGAAGTCGTCAGCAGTGCCACTGTTACGTCACAAAGA
ACTCGTCTTTTCAGTCGCATGGATAGTTACCAGTAATCGCAACGATTTTCGGTTTTCTTT
CCGATTGCTGAACACACAACCGTCCTGGTTGTCAAATCTCGGTTTAACTAATCTTGAGTT
GTAATCGGCGATTATGTTCTTTTGAAATCATTTTATTTCTTGCTGCCTGCAAATCAAACC
ACTAGCCTGATGTTGTCTGCATTTTTTTAGTAATTATATGAGTGGAGCAATTCCTATCGT
TTTTTTGCACGATCACTGGTAAATAGGGCACCGAGTAACGCGTCGCTGTCAGCTGTAATA
AACAAGCCAACAAATGACTAAATTGCACAGGTAGAAAGCCATCTTTAATGTTCTCAATGT
TTCTCTGATAATTCAAACGATTTTTGATGATATTTATTTACCCGGATACTTTTAC
| ProSiteProfiles |
FERM_domain (IPR000299) - T[1-105] 25.872 |
| Gene3D |
PH-like_dom_sf (IPR011993) - T[9-103] 2.1E-33 - T[698-800] 5.3E-27 |
| Pfam |
FERM_PH-like_C (IPR018980) - T[18-104] 1.6E-22 |
| SMART |
FERM_PH-like_C (IPR018980) - T[18-109] 1.9E-34 |
| SMART |
FERM-adjacent (IPR014847) - T[113-158] 4.1E-10 |
| Pfam |
FERM-adjacent (IPR014847) - T[115-151] 1.3E-8 |
| Gene3D |
DBL_dom_sf (IPR035899) - T[299-508] 2.2E-36 |
| SUPERFAMILY |
DBL_dom_sf (IPR035899) - T[305-518] 2.75E-36 |
| ProSiteProfiles |
DH-domain (IPR000219) - T[306-498] 23.557 |
| CDD |
DH-domain (IPR000219) - T[308-496] 1.15131E-30 |
| SMART |
DH-domain (IPR000219) - T[310-497] 5.5E-27 |
| Pfam |
DH-domain (IPR000219) - T[310-495] 1.7E-26 |
| ProSiteProfiles |
PH_domain (IPR001849) - T[527-624] 14.346 - T[699-796] 13.778 |
| SMART |
PH_domain (IPR001849) - T[528-626] 1.2E-17 - T[700-798] 5.0E-17 |
| Pfam |
PH_domain (IPR001849) - T[529-623] 2.0E-9 - T[702-794] 4.0E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FARP2_HUMAN | 45.312 % | 671 | 0 |
| FARP1_HUMAN | 44.922 % | 711 | 0 |
| FRMD7_HUMAN | 57.718 % | 177 | 1.03E-46 |