- Transcript 'KH2012:KH.C2.321.v5....' >
- Transcript 'KH2012:KH.C2.216.v1....' >
- Transcript 'Cisavi.CG.ENS81.R0.1...' >
- Transcript 'KH2012:KH.C4.424.v2....' >
- Transcript 'Cisavi.CG.ENS81.R7.2...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R7.2308031-2312975.11965.t
Possible name(s)
SHMT1; SHMT2
Gene model
Location
R7 [2,308,030 / 2,312,975]
Amino acid sequence
Length: 477
>Cisavi.CG.ENS81.R7.2308031-2312975.11965.p
LKPLETKESLWLEESLEVNDPEIYKIIRNEKERQRDGLELIASENFTSGAVLEALGSCLN
NKYSEGYPGVRYYGGTENIDELELLCQKRALEVFKLNPAEWGVNVQPYSGSPANFAVLTA
VVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGLIDYDQLAQNA
KLFKPKLIIAGMSCYSRVIDYERMRKITDDNKAILMADMAHVSGLVAANVIPSPFEHCHI
VTSTTHKTLRGPRAGIIFYRRGVKVPAANGKPAEMYNFEKPINEAVFPGLQGGPHNHAYW
RGRLPVYILFTQKTSIKTYLFSQVVVNAQTLGRVLMDKGYDVVTGGTDTHLILVNLKSKG
LNGTDGNRADKVLEAIGVACNKNTCPGDKAALRPSGLRLGSPALTSRGLNAKDFERVADF
IDRGVQLAVDIQKSLDPKATFKDFRTKLNNDQEIVAKVAAIKSEVASFARTFPIPGL
Nucleotide sequence
Length: 1,811
>Cisavi.CG.ENS81.R7.2308031-2312975.11965.t
TTAAAGCCTTTAGAAACAAAAGAATCGTTGTGGTTAGAAGAGTCGCTCGAAGTTAATGAC
CCAGAAATCTACAAAATCATCAGAAATGAGAAAGAACGCCAAAGGGACGGTTTAGAATTA
ATTGCATCAGAAAATTTTACTAGTGGTGCCGTCTTAGAAGCTCTTGGGTCTTGTTTGAAC
AACAAATATTCCGAAGGATATCCAGGCGTAAGATACTATGGAGGAACCGAAAACATTGAC
GAACTTGAGTTACTCTGTCAAAAACGAGCTTTGGAAGTTTTTAAACTTAATCCTGCAGAA
TGGGGAGTCAATGTCCAACCATACTCTGGTTCACCTGCCAATTTTGCCGTCTTAACAGCG
GTGGTAGAACCACACGGCCGAATAATGGGATTAGATCTTCCGGACGGTGGCCATCTCACA
CATGGATTCATGACCGAAAAGAAAAAAATATCAGCAACATCCATATTTTTCGAATCGATG
CCATACAAGGTCAATCCAGAAACTGGGCTGATTGATTACGACCAACTCGCTCAAAATGCA
AAACTTTTCAAGCCCAAGTTGATCATCGCAGGCATGAGCTGTTATTCAAGAGTCATCGAT
TACGAGCGTATGAGAAAAATCACAGACGACAACAAGGCAATATTAATGGCGGATATGGCT
CACGTCAGTGGACTAGTTGCTGCAAATGTCATACCATCGCCATTTGAACACTGCCATATC
GTCACCAGTACCACCCACAAAACCTTAAGGGGTCCCAGGGCTGGTATCATCTTCTACAGA
CGTGGGGTCAAAGTCCCTGCAGCCAACGGCAAACCCGCTGAAATGTACAACTTTGAAAAG
CCGATAAACGAGGCCGTTTTCCCTGGTTTGCAAGGTGGTCCACACAACCACGCCTATTGG
CGGGGTCGGTTGCCTGTGTACATATTGTTTACACAGAAAACTTCAATAAAAACATATCTT
TTCTCACAGGTTGTGGTAAATGCACAAACACTGGGCCGAGTGCTGATGGACAAGGGTTAT
GACGTTGTCACCGGTGGCACGGATACCCATCTTATTCTTGTCAACCTCAAAAGCAAGGGT
TTAAATGGTACCGATGGAAATCGTGCCGACAAAGTATTAGAAGCCATTGGGGTAGCATGT
AACAAGAACACCTGTCCCGGTGATAAAGCTGCTCTCAGACCCAGTGGGTTACGTTTAGGA
TCACCTGCTCTCACTTCACGGGGACTCAATGCCAAAGACTTTGAAAGGGTTGCAGACTTT
ATTGACAGGGGAGTACAACTTGCAGTTGATATTCAAAAAAGTCTCGATCCGAAAGCCACG
TTCAAGGATTTCAGAACCAAGCTCAACAACGACCAAGAAATTGTCGCCAAGGTTGCAGCC
ATAAAAAGCGAGGTCGCAAGCTTCGCTCGCACATTTCCCATTCCCGGCTTGAAGTACACA
TGAATGTCCATGAAATTGGATGTGAAAGTAACCGACAATATGTAAAACCTGCATCTTATC
GAACAAAAGACAAGCATGTGTAATTGCAGTAGTGCTTTAGACTAGAGTAGTGCCTTGTTT
TGTGGTACTTTATACTACCTAAAAACCTAAAATTACAATTATTAAAACGTTGCTTTTCCT
AACAACTATATTTACCTATAGATTTACCTGTAGATGCCTCGGTAGTAACTTGTGGACCAA
TCATGCATTTGTAAAACCGCTCAATTCCCTTTTAATGGTAGTAGCTCGACTAATATTCTA
GATGTTCCGTTTTCGTGAATGATTTCTGTTGTCGTGTGTAAAAATGTTGCTGCTGTTATA
AACAAAAAAGT
| PIRSF |
Ser_HO-MeTrfase (IPR001085) - T[3-477] 9.0E-162 |
| SUPERFAMILY |
PyrdxlP-dep_Trfase (IPR015424) - T[9-476] 3.42E-166 |
| Hamap |
Ser_HO-MeTrfase (IPR001085) - T[15-476] 40.237 |
| CDD |
Ser_HO-MeTrfase (IPR001085) - T[19-444] 0.0 |
| Gene3D |
PyrdxlP-dep_Trfase_dom1 (IPR015422) - T[20-44] 3.9E-197 - T[323-475] 3.9E-197 |
| Gene3D |
PyrdxlP-dep_Trfase_major (IPR015421) - T[45-322] 3.9E-197 |
| ProSitePatterns |
Ser_HO-MeTrfase_PLP_BS (IPR019798) - T[239-255] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GLYC_HUMAN | 66.597 % | 616 | 0 |
| GLYM_HUMAN | 59.657 % | 579 | 0 |