- Region 'REG00000234' >
- Transcript 'Cisavi.CG.ENS81.R7.2...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R7.2118166-2120118.11130.t
Possible name(s)
GRWD1; RBBP4; RBBP7
Gene model
Location
R7 [2,118,165 / 2,120,118]
Amino acid sequence
Length: 426
>Cisavi.CG.ENS81.R7.2118166-2120118.11130.p
MGEKDGNYDDSVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTCQWLPDVTKPEGKD
YTIHRLILGTHTSDEQNHLIIASVQLPTDDAQFDASHYDSERGEFGGFGSVSGKIEIEIK
INHEGEVNRARFMPQNPCIIGTKTPSSDVLVFDYTKHPSKPDPCGECNPDLRLRGHQKEG
YGLSWNPNLSGHLLSASDDHTICLWDVGSSPREGRILDARSIYTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSTTCNKPSHVVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFVHGGHTAKISDFSWNPNEPWVSCSVSEDNIMQVWQMAENIYNDEEPDGAASS
TPAAEL
Nucleotide sequence
Length: 1,614
>Cisavi.CG.ENS81.R7.2118166-2120118.11130.t
ATGGGTGAAAAAGATGGAAATTATGACGACTCTGTCGAAGAGCGTGTGATTAACGAAGAA
TACAAGATTTGGAAGAAGAACACTCCATTTCTGTATGACCTTGTTATGACCCATGCCCTT
GAGTGGCCAAGTCTTACTTGTCAGTGGCTTCCTGATGTCACAAAACCTGAAGGAAAAGAT
TATACGATTCACCGACTAATCCTTGGCACGCATACATCTGATGAACAAAATCATTTGATA
ATCGCAAGCGTCCAACTCCCAACCGATGATGCTCAGTTTGATGCCTCCCATTATGACAGT
GAGCGAGGTGAATTTGGCGGATTTGGCTCTGTAAGCGGAAAGATTGAAATAGAAATCAAA
ATTAACCATGAAGGAGAAGTAAACCGGGCAAGGTTTATGCCCCAAAATCCATGTATAATT
GGAACAAAGACACCTTCTAGTGATGTATTGGTGTTTGATTACACGAAGCACCCGAGCAAG
CCTGACCCATGTGGGGAGTGCAACCCGGATCTACGGCTCCGTGGGCATCAGAAGGAAGGG
TATGGCTTGTCATGGAATCCAAACCTGAGTGGACACCTACTAAGTGCTTCCGACGACCAC
ACAATCTGTCTGTGGGATGTAGGAAGTTCACCACGAGAAGGGCGAATCCTGGACGCACGA
AGCATCTACACTGGGCACACAGCAGTGGTTGAAGACGTTTCGTGGCACTTGTTACATGAG
AGTTTGTTTGGTTCAGTGGCTGATGACCAGAAGTTGATGATTTGGGACACAAGATCGACA
ACATGCAACAAACCCAGCCATGTTGTTGATGCCCATACAGCTGAAGTCAATTGCCTTTCA
TTTAATCCCTACTCTGAGTTTATTTTAGCTACTGGTTCTGCCGATAAAACAGTGGCTCTG
TGGGATTTACGAAACCTCAAGTTAAAACTCCATTCATTTGAATCACATAAAGATGAAATA
TTTCAGGTGCAATGGTCCCCGCACAATGAGACCATCCTTGCGTCAAGTGGAACTGACCGT
AGGTTGAATGTCTGGGATCTCAGCAAGATAGGGGAGGAGCAGAGTGCCGAGGATGCAGAA
GATGGTCCGCCAGAGCTGCTTTTTGTACACGGAGGACACACGGCAAAGATCTCCGACTTC
TCATGGAATCCAAATGAGCCATGGGTCTCTTGCTCCGTCTCCGAAGACAACATAATGCAA
GTTTGGCAAATGGCTGAGAATATTTACAACGACGAGGAGCCAGATGGTGCTGCTTCATCC
ACACCCGCAGCTGAGCTTGAGCAAAACGCATCCTAAAGTTCATTTCCATCACAGTTCAAT
TTTTTGTGACATTACCACTTTTATACGCTTGACCTATAACACCAATATTAAAGAAGAGGA
GCAATATAAATTTATAAAATTTTATGCTTCATAAATTTTATAAACTTTATCTTCTCTTTT
TGGATGGTTGATAAAATTTTGTAAAAGACTTCAATATTCACAACTAATTTGTTTATCAAG
TATCTTATCAATGTTAACGAACTGATTTCCAATGGATTATAAGTTGTTGTATATATGTAA
TAAAATAAGGTCTACATTGTATTCATTTTGTAGTTTTCTCTCTAACTTTTTGTT
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[2-421] 5.3E-167 |
| Pfam |
Histone-bd_RBBP4_N (IPR022052) - T[19-87] 8.9E-29 |
| SMART |
WD40_repeat (IPR001680) - T[112-153] 34.0 - T[166-206] 3.7E-6 - T[216-256] 0.23 - T[262-302] 1.6E-8 - T[306-346] 7.0E-7 - T[363-403] 0.016 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[114-409] 3.0E-49 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[173-207] 11.945 - T[223-265] 9.071 - T[269-305] 13.85 - T[313-355] 12.948 |
| Pfam |
WD40_repeat (IPR001680) - T[173-206] 0.042 - T[222-256] 0.12 - T[264-302] 3.4E-7 - T[310-346] 3.4E-4 - T[367-402] 0.0019 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[173-412] 34.776 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[193-207] 1.4E-8 - T[289-303] 1.4E-8 - T[333-347] 1.4E-8 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[193-207] . - T[289-303] . - T[333-347] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GRWD1_HUMAN | 28.664 % | 118 | 2.32E-29 |
| RBBP7_HUMAN | 87.136 % | 769 | 0 |
| RBBP4_HUMAN | 90.191 % | 806 | 0 |