Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Moocci.CG.ELv1_2.S48...'
  2. Transcript 'Cisavi.CG.ENS81.R7.1...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R7.1659966-1661579.08722.t

Possible name(s)

LRWD1; TBL1XR1; WDR5B

Location

R7 [1,659,965 / 1,661,579]

Sequences

Amino acid sequence

Length: 228

>Cisavi.CG.ENS81.R7.1659966-1661579.08722.p
MKDETKTSNLVATCGGDTVCITDCTTAQVQMRFQQNNEEFYVVAWTTMDLNGHKSNILVS
AGCLGFIHLLHPKQGICYGRIKAHSSPIQTVHFSPFSSTHLLTGDKKGNIFLLDIDIPTV
PEYKFSWKKLMSFVGVDATPLKFCVPPVGGYLLSATEYGLHCWKSEGLMRNHKAGPLQTV
SVLCELCFPGVQESEPTVDSLTMLTDGIVATKVAQQGSIFLWKFSDVQ

Nucleotide sequence

Length: 1,071

>Cisavi.CG.ENS81.R7.1659966-1661579.08722.t
CAAGGATGTCTCAGAGCTTCGGGAGAGATTTGCGACAAGAGCGAAAGAGAGAATACATTA
TGGGCCGAATTCGCTTAAAGCGTACAGAATTTGGAGAGTTAATTCCATCGCTAGAGAGCT
GGTTAATTACAAAATTGAGTGTCCAGGTGGTTGTTTGTTACCTGCTATAATAGATGATGA
GCCTAGTGGTAAAGAGGTTGTTTTAAAATCAATCGATAACAAGCACTCGGGAAAAAATGG
CAATACTAGCAAAGCTGGAAAACGCAAGAGTGATGCAACAAGTGAAAATAGGTACTCAGC
TCATGCCTTTCTACAATGTCATAGCAAAGAAAATGGACCAAATGACTTCTCAACCCAAGT
GTGGTGCTGTACATTCGAACCCGATATGAAAGACGAGACAAAAACTTCAAACCTCGTTGC
CACCTGTGGCGGAGACACGGTCTGCATCACTGACTGCACCACTGCGCAAGTGCAAATGAG
ATTCCAGCAAAACAATGAAGAATTTTACGTCGTGGCGTGGACAACTATGGATCTAAACGG
GCATAAAAGCAACATCCTTGTTTCTGCAGGCTGTCTGGGCTTCATTCACCTTCTGCACCC
TAAACAAGGGATTTGTTACGGTCGTATAAAGGCACACTCTTCCCCAATCCAGACGGTCCA
CTTCTCACCTTTCTCTTCAACACATCTGTTAACAGGGGACAAGAAAGGGAACATATTTCT
GCTTGACATTGACATCCCCACAGTCCCAGAATACAAGTTTAGTTGGAAAAAGTTAATGTC
CTTCGTTGGAGTGGACGCAACACCTTTAAAGTTTTGCGTCCCACCTGTAGGTGGATATCT
CTTAAGCGCGACTGAGTATGGATTGCACTGTTGGAAATCTGAAGGTTTAATGAGAAACCA
CAAAGCTGGACCTTTGCAGACAGTAAGCGTGTTGTGTGAGCTTTGCTTTCCAGGTGTTCA
AGAGAGCGAACCGACTGTCGACTCGCTGACCATGCTGACCGATGGTATTGTTGCTACCAA
GGTCGCACAGCAAGGCTCTATTTTTCTGTGGAAATTTTCGGATGTCCAAGC

InterProScan

Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[2-228] 1.1E-24
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[7-224] 2.4E-19
SMART
WD40_repeat (IPR001680) - T[26-71] 430.0 - T[74-114] 0.0047 - T[126-164] 180.0

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LRWD1_HUMAN 35.897 % 125 2.66E-33