- Transcript 'KH2012:KH.L153.32.v3...' >
- Molecular Tool 'Titf>RAR-TALEN (Yoshida2017)' >
- Transcript 'Mooccu.CG.ELv1_2.S58...' >
- Transcript 'KH2012:KH.L155.7.v1....' >
- Transcript 'Cisavi.CG.ENS81.R696...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R696.13762-21737.05986.t
Possible name(s)
HOXA10; HOXC10; HOXD10
Gene model
Location
R696 [13,761 / 21,707]
Amino acid sequence
Length: 319
>Cisavi.CG.ENS81.R696.13762-21737.05986.p
MSATARNPTPPSNGGKYYPGGSPQNYPTMDPEPKLATLKGSQERSSEEEGRKEEDPQHPD
AFYGSSGAGAGVALPPFPGIPGIKTTETEEWGAGGKIRTEYPAFSDVSKTTSFTGDSPNQ
VSTPKPEPPEDESEEGDPTKHWLTASGRKKRVPYTKYQLLELEKEFHFNQYLSRERRLEV
AKSVKLSDRQVKIWFQNRRMKWKKERREERLRDDHHPMPGIHHPGVPHHGMPAHYTSTAA
ALAAAGIGHLNPHPFTNQPPMVTDMTYGYAPSPAIPAPGRHHGVNQMAAVDFFTSWHHQY
SVPPRDPTNPALQLGCMYN
Nucleotide sequence
Length: 1,201
>Cisavi.CG.ENS81.R696.13762-21737.05986.t
CACACGAAACAAGACTCATTGTTCGCGTACAATGTCCGCTACAGCGCGGAACCCGACTCC
CCCAAGCAACGGGGGGAAATACTACCCCGGGGGTTCCCCGCAGAACTACCCCACCATGGA
CCCCGAACCGAAACTGGCGACGCTGAAGGGAAGTCAGGAGAGGAGTTCGGAGGAGGAGGG
GAGGAAGGAGGAAGATCCGCAACATCCGGATGCTTTCTACGGATCCTCCGGAGCAGGAGC
GGGAGTTGCTCTTCCGCCCTTCCCGGGGATACCTGGGATCAAAACCACGGAAACGGAGGA
ATGGGGCGCCGGGGGTAAGATTCGAACCGAATACCCAGCGTTTAGTGACGTCAGCAAAAC
GACGTCATTCACCGGGGATTCCCCGAACCAAGTTTCAACTCCGAAACCTGAGCCGCCCGA
GGATGAATCTGAAGAAGGCGACCCAACCAAACATTGGCTGACCGCCAGTGGGCGCAAGAA
ACGCGTGCCGTACACAAAGTACCAACTACTGGAGTTGGAGAAAGAATTTCATTTCAATCA
ATATCTTTCACGTGAGAGGCGATTGGAGGTCGCCAAATCGGTGAAGCTGAGCGACCGACA
AGTGAAGATTTGGTTCCAAAATCGACGAATGAAGTGGAAGAAGGAACGACGTGAGGAACG
ACTGAGGGATGACCATCACCCGATGCCGGGGATCCACCACCCGGGAGTTCCCCACCATGG
AATGCCAGCTCATTACACCAGCACAGCTGCAGCACTGGCAGCGGCCGGAATCGGTCATTT
GAACCCCCACCCATTCACCAACCAGCCGCCCATGGTGACGGATATGACGTATGGCTACGC
ACCGTCGCCCGCCATTCCAGCTCCAGGGCGCCACCACGGGGTAAACCAGATGGCCGCAGT
CGACTTCTTCACGAGTTGGCATCACCAGTACTCTGTCCCCCCACGTGACCCCACCAACCC
CGCCTTACAACTCGGGTGCATGTACAACTGACGTCAGCACATGACGTCACCGGGTTCAGT
GAAGCGTGAAACACGGCGGCCATGTTTGAGCCCAATATTATAATGAACACGACATGTCGC
TTGAAACATGTTCCTTTGTTTTCTCGTTTCCTTCTTAACTTTATATCATATTTCATTCCG
GATTACGCAATCCGTAGTGCATCATGCTAATAACGTACCGTATCACGCATGCAAACCTAC
C
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[134-207] 9.41E-26 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[145-205] 21.411 |
| SMART |
Homeobox_dom (IPR001356) - T[147-209] 1.5E-26 |
| CDD |
Homeobox_dom (IPR001356) - T[148-206] 1.6126E-26 |
| Pfam |
Homeobox_dom (IPR001356) - T[148-204] 1.4E-21 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[169-180] 1.8E-7 - T[184-194] 1.8E-7 - T[194-203] 1.8E-7 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[180-203] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HXD10_HUMAN | 66.667 % | 132 | 6.96E-36 |
| HXC10_HUMAN | 48.649 % | 122 | 3.87E-32 |
| HXA10_HUMAN | 51.969 % | 126 | 3.73E-33 |