Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R67.826943-833149.11938.t

Possible name(s)

ATP1B1; ATP1B2; ATP1B3

Gene model

Cisavi.CG.ENS81.R67.826943-833149

Location

R67 [826,942 / 833,149]

Sequences

Amino acid sequence

Length: 335

>Cisavi.CG.ENS81.R67.826943-833149.11938.p
MSDTKDSDSDSGTGRCAGCMESTSEKFRGFLNFLWNPEEKTVLGRGGKSWGRILIFYLFY
YAFLAALFAVSITIVLGTLDPNEPRFQTRLQAPGLSIQPKLDASIKRTSDVIFTAGQADT
YTQYTNTLTEFLKPYKENQATLNNCTNGKVKINQQYSMEKPPPSCRFDLADLGPCRNEPY
GYDVGRPCIFVKVNRIIKWYPVGFTDLSKAVGNADSNAPPLKDVLMARNRAYDPNRMYVS
CYDVTSGNQTYLNTAAGVSANTMYYPEDNGIPFKYFPYYGAFLQKDYMTPLVAVQFNKVT
RNVDVRVRCKAYALNIQDNERMRIGYFTFTLRVNE

Nucleotide sequence

Length: 1,368

>Cisavi.CG.ENS81.R67.826943-833149.11938.t
CTTATTAGTGTGTAGCATTAAATTACACCCGTTTGTTATAATATTGGATTTCAGGCAAGA
CACCGTGGTACACTCTGTTGGCTTACGTTTAAAAATGTAACGTGTTCATCAAGAAAATTT
GAACAAACGGTAGGTGGTAAGCATGTCCGATACAAAAGATTCAGATAGTGATTCTGGCAC
CGGGAGATGTGCAGGCTGCATGGAATCAACATCCGAGAAGTTCCGTGGTTTCCTCAACTT
CTTGTGGAATCCGGAGGAGAAGACTGTGCTTGGACGTGGCGGCAAAAGCTGGGGAAGGAT
TTTAATCTTCTATCTCTTCTACTACGCTTTCCTTGCCGCCCTGTTTGCGGTCTCCATCAC
CATCGTACTTGGGACGCTCGATCCAAATGAACCGCGATTCCAAACTCGTCTTCAGGCACC
AGGTCTTTCTATCCAACCGAAACTTGACGCCAGCATCAAAAGAACATCGGACGTTATCTT
CACCGCCGGACAAGCGGATACCTATACCCAATACACAAACACACTCACAGAATTCTTAAA
ACCATACAAGGAGAACCAAGCAACGCTTAACAACTGCACAAATGGTAAAGTGAAGATCAA
CCAGCAATACTCCATGGAGAAACCTCCACCGTCCTGCAGATTCGATCTCGCCGACCTCGG
TCCCTGCAGGAACGAGCCATACGGATATGACGTAGGCAGACCTTGCATCTTCGTCAAAGT
CAACAGGATCATCAAATGGTATCCAGTCGGCTTCACCGATCTATCGAAGGCTGTTGGCAA
CGCGGATTCAAACGCCCCGCCTCTGAAGGATGTGCTTATGGCGCGGAACAGAGCGTACGA
CCCAAACCGCATGTATGTCTCCTGCTACGACGTGACCAGTGGCAACCAGACCTACTTAAA
CACCGCGGCGGGCGTCAGCGCTAACACCATGTACTACCCAGAGGATAACGGCATTCCGTT
CAAATACTTCCCATACTATGGTGCTTTCCTGCAGAAGGACTACATGACACCGCTAGTGGC
TGTGCAGTTCAACAAAGTTACTAGAAATGTCGACGTGCGTGTACGCTGCAAGGCATACGC
ACTCAACATCCAGGATAACGAGCGCATGCGCATTGGATACTTCACCTTCACATTGAGAGT
CAACGAATAAATCATCCGATTACCCGACCATCCTGTAGCATCACACACCGATTTTAGTCA
TTTTCTTACTTGTTTTTACTGTTGTATTTGGTAGCGGAACAAAATTTTATGAAATTTAAG
CAAGCATTGACATATTTGTAGCATGGAACCGTGTAAACCTCTTAAAGGTTGTTATGATTT
CTTAACCAATTCGAATAAATTCAATTTGGCATTTTAATTTCTTTGGGT

InterProScan

Gene3D	Na/K_ATPase_sub_beta_sf (IPR038702) - T[20-335] 1.1E-81
PANTHER	Na/K_ATPase_sub_beta (IPR000402) - T[20-334] 7.1E-78
Pfam	Na/K_ATPase_sub_beta (IPR000402) - T[22-321] 1.7E-89
TIGRFAM	Na/K_ATPase_sub_beta (IPR000402) - T[23-333] 2.6E-70

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
AT1B1_HUMAN	31.546 %	154	2.24E-44
AT1B2_HUMAN	31.385 %	162	6.57E-48
AT1B3_HUMAN	32.797 %	139	4.52E-39