- Transcript 'Cisavi.CG.ENS81.R65....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R65.824416-838145.10779.t
Possible name(s)
PRICKLE1; PRICKLE2; PRICKLE3
Gene model
Location
R65 [824,415 / 838,145]
Amino acid sequence
Length: 991
>Cisavi.CG.ENS81.R65.824416-838145.10779.p
MNMPAVATEQFRGNAVQSVDPVSAELGQDMAPRGQQSETRVRRRQSRRHRHNRSSDEEND
VDSGCALEEYAWVPPNLTPDQVRYYFTSLPEDKVPVVDSIGDKYRVRQLLHQLPPHDDKV
CYCNDLSEEEKRELRLFSDQRKKDYLGCGKIRVLPLNTPSTPCSECGITVKGGDIVAVAA
RADQGMCWHPACFVCSVCTELLVDLFYFYQDGRLYCGRHHAETLKPRCSACDEIIFSDEC
TEAEGRHWHMDHFCCFECDRVLGGQRYIMRDGKPNCTQCFEALYAEYCDMCGDLIGLDAG
QMQYEGQHWHATDSCFCCSRCRKSLLGRPFLPKHGRIFCSKSCSLGEDPAHSESEHSSSQ
YENPQLPTSHNVRRSLNLDNLSIHDKPWEAEKGELSPASNNVFIDAVDMYPTQSAVSASA
RYTKNHVRPTHPYLDGMDPANPDLQGEDDAVFETVAPPRKSASDPVTSPTSTVSSRATSK
NGVQFPQNTYNSTDSSGYNSSSTLDAIEHQQNAAIKAAMASNYNYGLKPKQTQSPNKRSQ
DADGSVLTSEFTQFHPAQSRTSPPTIIGGRKVAPEIKMKIDSLSKSSDSDNKSPPVNVVS
MLPKSAVPIPAPRARYPPSITPSPPTNGPSELTSPWMHKSHLRNDSPTENRGTTASPTSA
APSPQESKGSPLQRTISERMANKRRSREPISLTDPPKPDDRLRKDENVFLTESDKTSPEL
KSILKKSSSKHFRNRDRGSISNSLDRLDFDSSHRKWNSKMFASDDEDGAGFGDAQGDFSS
FQRGQRLYSSARFPDDVTEKSRSQNQGGRPRSQHRTRFKDNSSIGRTHSAVDINQLDCAQ
QRRSSKPGKTCSKLSGKSGCSKKLKRTRSTDFAFERSALTPTSSRKNRRGKKFVEDEEED
GWCSTCTSSSDDSDYERWDVMGTSPTRSPKSAMRRGSAPVCTRVSVTRRQPAHPFLGNPD
PAITASAAGFTGVLSASNAAEFFFYFAYAIQ
Nucleotide sequence
Length: 3,293
>Cisavi.CG.ENS81.R65.824416-838145.10779.t
ATGAACATGCCAGCGGTCGCAACTGAGCAGTTCCGCGGAAACGCGGTACAATCCGTCGAT
CCCGTCTCAGCGGAACTTGGCCAGGATATGGCGCCGAGAGGACAGCAGAGCGAAACGAGG
GTTCGACGACGACAGTCGAGGCGACATCGCCACAACAGAAGCTCGGATGAAGAAAATGAC
GTCGACAGCGGTTGTGCATTGGAGGAATATGCCTGGGTGCCACCGAACTTAACTCCAGAC
CAAGTTCGGTACTACTTCACTTCGCTACCAGAGGATAAAGTGCCGGTGGTCGACAGCATA
GGAGACAAGTACAGAGTCCGACAGCTTCTACACCAGTTGCCACCCCACGATGACAAGGTT
TGCTACTGTAATGATCTTTCCGAAGAAGAGAAGCGTGAACTCCGACTCTTCAGCGATCAG
AGGAAGAAGGATTACCTCGGATGTGGGAAGATCAGAGTTCTTCCTCTTAACACGCCAAGC
ACTCCTTGCTCCGAGTGCGGCATCACGGTAAAGGGAGGCGACATCGTAGCGGTTGCCGCA
AGAGCAGACCAGGGAATGTGTTGGCATCCCGCTTGCTTTGTGTGTTCCGTGTGCACAGAA
CTGCTGGTGGATCTTTTCTACTTTTACCAGGACGGACGTCTGTATTGCGGGCGCCACCAC
GCGGAAACGTTGAAACCTCGCTGCTCTGCCTGTGACGAGATCATTTTCTCGGACGAATGC
ACTGAGGCAGAGGGCAGACATTGGCATATGGACCATTTCTGCTGCTTCGAGTGCGACAGA
GTGCTTGGTGGGCAGCGCTATATAATGCGCGACGGAAAGCCCAACTGCACCCAATGCTTT
GAAGCGCTGTATGCCGAGTATTGCGACATGTGTGGAGACCTTATCGGTTTGGACGCTGGT
CAGATGCAGTACGAAGGGCAGCACTGGCACGCCACCGATTCCTGTTTCTGTTGCAGCCGA
TGCCGCAAGTCGCTCCTCGGCCGCCCATTTCTACCGAAGCACGGACGAATATTTTGCTCG
AAATCGTGCAGTCTCGGCGAGGATCCAGCACACTCGGAATCGGAGCACAGTTCATCCCAG
TACGAGAACCCGCAGTTACCGACGTCGCATAACGTAAGGAGGAGTCTAAACTTGGACAAC
CTTTCAATCCATGACAAACCGTGGGAAGCGGAAAAGGGGGAGCTAAGTCCCGCCTCCAAC
AATGTCTTTATCGACGCCGTCGACATGTACCCGACGCAATCCGCCGTTTCCGCAAGCGCG
CGATACACCAAGAACCACGTCCGACCAACCCACCCTTACCTGGACGGAATGGACCCTGCT
AACCCCGACTTACAGGGTGAAGACGACGCGGTGTTTGAGACGGTCGCGCCACCGCGGAAA
TCAGCTTCTGACCCGGTCACCTCACCCACAAGCACCGTATCATCGAGAGCGACCTCAAAA
AACGGTGTCCAGTTCCCGCAGAATACATACAACAGTACCGACAGCAGTGGCTATAACAGC
AGCAGTACATTGGATGCTATAGAGCACCAACAAAACGCCGCCATTAAAGCCGCCATGGCG
TCCAACTACAACTACGGCCTCAAACCAAAGCAAACGCAGTCCCCGAACAAAAGGTCTCAG
GATGCTGATGGGAGCGTACTAACCTCGGAATTTACCCAGTTCCACCCAGCTCAATCTCGC
ACCTCACCCCCCACCATAATAGGGGGACGCAAAGTGGCCCCTGAAATAAAAATGAAAATC
GATTCGCTTTCGAAGTCGTCAGACAGCGATAACAAATCTCCCCCTGTCAATGTGGTCTCT
ATGTTACCCAAGTCAGCTGTCCCCATTCCGGCCCCACGGGCAAGGTACCCCCCTTCCATC
ACCCCATCGCCCCCAACCAACGGACCATCCGAACTCACGAGCCCGTGGATGCACAAGAGC
CACTTAAGGAACGACTCGCCCACAGAGAACCGGGGAACCACCGCCTCACCCACCTCTGCG
GCCCCAAGCCCCCAGGAAAGCAAGGGGAGTCCCCTACAGCGCACCATCAGCGAGAGAATG
GCCAACAAACGACGAAGTCGAGAACCGATCAGTTTAACTGATCCTCCGAAACCGGACGAC
CGGTTACGAAAAGATGAGAACGTATTCCTGACAGAGAGCGATAAGACAAGTCCGGAGTTA
AAGAGCATTCTGAAGAAAAGTTCTTCTAAACACTTCCGCAACCGAGACCGAGGTTCGATC
TCAAACTCATTGGATCGCCTTGATTTCGACAGCAGCCACCGTAAGTGGAATAGCAAAATG
TTTGCTTCAGACGACGAAGACGGTGCCGGGTTCGGTGACGCGCAAGGCGACTTCTCCAGC
TTTCAACGCGGTCAGCGCCTGTACAGCAGCGCCAGATTCCCTGACGATGTCACTGAAAAA
AGCCGATCTCAAAATCAAGGCGGGCGACCACGATCGCAACACCGAACTCGGTTTAAAGAC
AATTCGTCGATCGGTCGGACCCATAGCGCTGTCGATATCAATCAACTCGACTGCGCGCAA
CAGCGAAGATCCTCGAAACCAGGAAAGACCTGCAGTAAACTATCGGGGAAATCCGGGTGC
AGCAAGAAGCTGAAACGAACCAGGTCAACCGATTTCGCGTTCGAACGATCCGCTCTCACT
CCCACCTCCTCCCGGAAGAACCGGAGAGGAAAGAAGTTCGTGGAAGATGAAGAAGAAGAC
GGCTGGTGCTCCACGTGCACGTCGTCGAGCGATGACAGCGATTACGAACGCTGGGACGTC
ATGGGAACCTCCCCGACAAGAAGTCCCAAGAGTGCAATGAGACGTGGTTCTGCCCCAGTT
TGCACCCGAGTTAGCGTCACTCGGCGGCAACCGGCCCACCCCTTCCTAGGAAATCCAGAC
CCAGCCATTACGGCCTCTGCCGCCGGCTTTACCGGGGTTTTATCGGCCTCAAATGCCGCG
GAATTTTTCTTCTACTTCGCATATGCGATACAGAAGAAGACAGTCGAAGAAACACTGCAT
CATTATGTAAATTATTTCGTACGAAACCAAGTGGAAAACGACCGTTTTAACTTATTTCTG
TCCTATTTTTAAAACAATGTCGACATTTTTTCGTATTGCAACAATCTTTTCCGCTGTTTA
CAAATCACAATATTTGACGTGGTTGCCAACACAAAACGACCAAACTGATTTTGAGTCGCC
ATTTTTGATCACACTCTGCAGTGAGCCCCTATCATCTACTTTTTGTGTCAAATCTTTCTA
GATATTTCTATTCGCCAACCTTGTCTTGTTTAGAATTTGCGCGGAGCGAATTT
| ProSiteProfiles |
PET_domain (IPR010442) - T[51-159] 33.661 |
| CDD |
PET_prickle (IPR033723) - T[59-155] 3.54492E-60 |
| Pfam |
PET_domain (IPR010442) - T[68-152] 8.4E-34 |
| ProSiteProfiles |
Znf_LIM (IPR001781) - T[161-225] 9.999 - T[226-286] 13.009 - T[287-350] 6.821 |
| SMART |
Znf_LIM (IPR001781) - T[162-219] 1.0E-10 - T[227-279] 7.0E-14 - T[287-342] 1.5E-7 |
| Pfam |
Znf_LIM (IPR001781) - T[163-222] 5.5E-10 - T[228-282] 3.8E-10 - T[288-341] 1.0E-5 |
| CDD |
LIM1_prickle (IPR033725) - T[163-221] 3.89817E-36 |
| CDD |
LIM2_prickle (IPR033726) - T[226-281] 5.26366E-39 |
| ProSitePatterns |
Znf_LIM (IPR001781) - T[228-262] . |
| CDD |
LIM3_prickle (IPR033727) - T[286-344] 1.07258E-38 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PRIC2_HUMAN | 61.891 % | 487 | 4.63E-158 |
| PRIC1_HUMAN | 64.901 % | 458 | 2.21E-147 |
| PRIC3_HUMAN | 66.667 % | 429 | 4.92E-139 |
