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- Transcript 'Cisavi.CG.ENS81.R65....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R65.617804-626336.09449.t
Possible name(s)
SRP72
Gene model
Location
R65 [617,803 / 626,336]
Amino acid sequence
Length: 495
>Cisavi.CG.ENS81.R65.617804-626336.09449.p
MAAQSPTNMTVLYGELNKFINVSDYKQALKAANKSKWIYINEGKEDTEAMHCKAVCMMQM
SQFAEALKFIEGAPEIKDAYPFSLLVFEKAYCQYRLLQTQDALDTINQVKSPDLRLLELK
AQVLYKLGQYSASLALYKNLIKEFSDEFEEERMTNISAVHAALSAFDGVKTELGFEVESY
EQLYNKGCWLLGNNRVVEAQKVLVQAEEVCRGLYVDDPDVPEEEIEGEISIIRVQLAYAL
QLQGKTDEALTIYNQVIRLRPTDIALVAEQNVFDSRKKMKATIAPGLENKLVPFQKKKID
FNRALLFMYSNQWEACRKLLKSLQRDHTDSIIPCLIQAAQIGREKGSSKAVEYLQHSDPD
ISPEIDLTDVKLCLVQLLLGLGNLEEACLVLEALGDVTYTPAVVSCLVSLYNAQRGGEVK
AARLMEHAIEWHKNNKSPAPILSSLMWESSEFALKHNNPKSAAATLEEILRFEPKNVKVL
AKLIFAYSMFNQTKA
Nucleotide sequence
Length: 1,485
>Cisavi.CG.ENS81.R65.617804-626336.09449.t
ATGGCGGCCCAAAGCCCAACGAACATGACCGTACTTTACGGCGAACTCAACAAGTTTATC
AATGTGTCCGATTACAAGCAAGCGCTGAAAGCTGCTAATAAAAGTAAGTGGATTTACATT
AATGAAGGCAAAGAAGACACAGAGGCCATGCATTGCAAAGCAGTATGTATGATGCAGATG
TCCCAGTTTGCAGAGGCACTCAAGTTTATTGAGGGAGCACCAGAAATCAAAGATGCTTAT
CCATTCAGCCTGCTTGTATTTGAGAAAGCTTACTGTCAGTACCGATTGCTTCAAACTCAA
GATGCATTGGATACTATCAACCAAGTTAAGAGCCCGGACCTCCGGCTATTGGAGCTTAAA
GCTCAAGTGCTTTACAAGCTTGGCCAGTACAGTGCATCATTAGCTCTCTACAAGAACCTC
ATAAAGGAATTCTCCGATGAATTCGAGGAGGAAAGAATGACGAATATATCAGCCGTGCAT
GCTGCTCTGTCCGCTTTCGACGGGGTTAAGACCGAATTAGGATTCGAGGTGGAGTCCTAT
GAGCAGCTGTACAACAAAGGCTGCTGGTTGCTGGGAAACAACAGGGTGGTGGAAGCCCAG
AAGGTTCTGGTGCAAGCTGAGGAGGTTTGCCGGGGTTTGTATGTTGATGATCCTGATGTT
CCAGAGGAGGAGATAGAAGGGGAAATTTCTATTATAAGAGTTCAACTGGCGTACGCGTTG
CAACTGCAAGGCAAGACAGATGAAGCGCTCACCATCTACAATCAGGTCATCAGACTACGA
CCGACCGACATTGCGTTGGTAGCAGAGCAAAACGTCTTCGACTCGCGCAAGAAGATGAAA
GCCACCATAGCACCAGGACTCGAGAACAAGTTGGTCCCGTTCCAGAAGAAGAAAATCGAC
TTCAACAGAGCATTGCTGTTCATGTATTCCAACCAGTGGGAGGCTTGCCGAAAACTGCTG
AAGTCATTACAACGCGACCACACCGACAGCATCATTCCGTGCCTCATTCAAGCAGCTCAG
ATTGGAAGAGAGAAAGGTTCCAGCAAAGCCGTGGAATACTTGCAGCACTCTGACCCAGAC
ATATCACCAGAGATCGACTTGACAGATGTCAAATTGTGTTTGGTGCAACTCTTACTCGGG
CTTGGAAATCTGGAAGAGGCTTGTCTTGTGCTAGAGGCGTTAGGAGATGTGACTTACACC
CCAGCTGTGGTATCGTGCCTTGTATCGCTGTACAACGCGCAGCGTGGAGGTGAGGTGAAG
GCGGCTCGGCTGATGGAGCACGCCATCGAGTGGCATAAGAACAACAAGAGCCCAGCCCCA
ATCCTTAGCAGCTTAATGTGGGAGTCGTCTGAGTTTGCATTGAAACACAACAACCCTAAA
TCTGCTGCTGCAACCCTTGAAGAAATATTAAGATTTGAGCCGAAGAATGTGAAAGTTCTA
GCCAAGTTGATTTTCGCTTATTCAATGTTCAACCAGACCAAGGCC
| PANTHER |
SRP72 (IPR026270) - T[1-495] 4.5E-136 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[7-86] 3.56E-14 - T[120-147] 3.56E-14 - T[179-267] 4.09E-8 - T[230-266] 3.56E-14 - T[301-492] 4.09E-8 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[8-171] 8.4E-45 |
| SMART |
TPR_repeat (IPR019734) - T[47-80] 470.0 - T[114-147] 49.0 - T[230-263] 0.006 |
| Pfam |
SRP_TPR-like (IPR031545) - T[48-161] 3.7E-16 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[230-263] 9.564 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[230-263] 8.644 - T[443-476] 5.487 |
| Pfam |
TPR_repeat (IPR019734) - T[235-262] 0.0036 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SRP72_HUMAN | 40.472 % | 363 | 9.38E-119 |