- Transcript 'KH2012:KH.C1.1027.v1...' >
- Transcript 'Cisavi.CG.ENS81.R62....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R62.437878-440169.03256.t
Possible name(s)
ZIC1; ZIC2; ZIC3
Gene model
Location
R62 [437,877 / 440,169]
Amino acid sequence
Length: 500
>Cisavi.CG.ENS81.R62.437878-440169.03256.p
MAFVGTLGYESSAGYQRPHHPYEAKDASFPQEVLIPQAYSTFQPAPHVEQQALSTTQSVW
SSGSASPPNQYKYQYGAWSNAPSLNFNLPVNFPHHPALHPSSQAFFAYSAFQHPQAEVRV
ELACKWTKSLPNMFENSDGCQFQKPENQQVQGEPCNLVFHSMLDLVTHVGRDHVGGPEHT
DHACYWQDCSRENKPFKAKYKLINHIRVHTGEKPFQCPYPGCGKVFARSENLKIHKRTHT
GEKPFCCEFSGCNRRFANSSDRKKHTHVHTTDKPYLCKVYGCEKSYTHPSSLRKHMKVHE
SQGDVICEPTIAAITSLSGISAPDSNNNISRGEDASPEHKIMDQSNSLSPPALSPCSIGS
EASASPCSVTEEQRICLPTNVVSPFAYAEHSTPTQNTEAKCEQDAYLLQPHAAQNNWQFP
ICHDQQVSPYVTTEKSSFPPICHSVEPVYYSQSSQQPFYPNMHPIQNTYSRHLGTSTSSF
HPFSHHVSSASGVFNPETVF
Nucleotide sequence
Length: 2,070
>Cisavi.CG.ENS81.R62.437878-440169.03256.t
GCACTGTGCCTGTAACGTAGCCGACGAACGCAACTTACTTTACAATCAATATGGCTTTCG
TTGGCACGCTTGGTTACGAGTCGTCTGCGGGCTACCAGCGTCCCCATCACCCATACGAGG
CCAAAGACGCCTCCTTCCCGCAGGAGGTTCTTATTCCTCAAGCATACTCGACTTTTCAAC
CCGCACCGCACGTCGAACAGCAAGCGTTATCTACAACACAATCGGTATGGTCCTCGGGCT
CAGCAAGTCCACCGAACCAGTATAAATACCAATACGGCGCTTGGTCAAACGCGCCTTCGT
TAAACTTCAACTTGCCCGTGAATTTTCCGCACCACCCAGCATTGCACCCGTCTTCCCAAG
CATTCTTCGCCTACAGCGCTTTTCAGCACCCACAGGCTGAAGTACGCGTCGAACTTGCCT
GCAAATGGACTAAGTCGCTTCCTAACATGTTCGAAAACTCGGACGGTTGCCAGTTTCAAA
AGCCAGAGAACCAGCAAGTCCAAGGGGAGCCGTGTAACCTGGTATTTCACAGCATGCTGG
ATCTTGTGACACACGTCGGACGTGATCACGTCGGTGGACCCGAACACACAGACCATGCTT
GCTACTGGCAAGATTGCTCACGAGAAAACAAACCTTTCAAAGCAAAGTACAAGCTGATCA
ACCACATCCGAGTGCACACTGGCGAAAAGCCATTTCAATGCCCCTACCCTGGATGTGGAA
AAGTGTTTGCTCGGAGCGAGAATTTGAAAATTCACAAACGCACTCACACAGGAGAGAAGC
CATTTTGTTGCGAGTTTTCTGGTTGCAACAGAAGATTTGCGAACAGTTCCGATCGGAAGA
AGCACACGCACGTTCACACCACCGACAAGCCATACTTGTGCAAGGTTTACGGCTGCGAGA
AAAGCTACACCCACCCCAGCTCCCTTCGCAAGCACATGAAAGTTCACGAATCCCAGGGAG
ACGTCATTTGCGAGCCAACCATCGCCGCCATTACTTCACTGTCAGGGATCTCGGCACCGG
ACAGCAACAACAACATCTCGCGCGGAGAGGATGCATCTCCGGAGCACAAAATCATGGATC
AGAGCAACTCCCTCTCGCCTCCAGCCCTCTCCCCTTGTTCCATTGGCAGCGAGGCTTCGG
CTTCACCGTGCTCAGTAACGGAAGAACAAAGAATCTGTCTTCCTACCAACGTAGTGTCTC
CGTTTGCATACGCGGAGCATTCCACCCCGACACAAAACACGGAAGCAAAATGTGAACAAG
ACGCATACCTGCTGCAGCCACACGCGGCGCAAAATAACTGGCAGTTTCCGATCTGCCACG
ATCAGCAAGTTAGTCCCTACGTCACTACCGAAAAGTCCTCGTTCCCACCAATCTGTCATA
GCGTCGAACCGGTGTACTACTCTCAAAGCTCGCAGCAGCCTTTTTACCCGAACATGCACC
CGATCCAAAATACATATTCCCGTCACCTTGGAACAAGCACGAGTTCGTTTCACCCGTTTT
CTCACCACGTTTCAAGCGCATCCGGCGTGTTTAACCCGGAAACTGTTTTTTAAAGTGTTT
CTATCACTATATTTGTTGACCGTCCAGACGAGTGGCCGCCATTTTGTTTTCGCACCGCGC
ACCGCACGCCTACCCGTCATTACGTGTTACTCGCACCGGTAACGGTTGCGATTTTTCCTT
CACTGCACTTTGGTGTTGTTATATCTTCTTTTAAAAGTCCACATTGTGCCTACTGCATTT
TGTTGCTTTTTATGGCAAGCACAGAAGGATTTTTTATTTTAGTTATTTCTATTTTCTATT
CTCACCATTTTGCCTCAGTTTTGTGCCTTCATTCTTCAATATAATGTGCTTTATTCTTCA
ATTTATGTTTTCGTTTAACACGTACATTTTTAAAAAAATCCTCCTACATTATAACACTGG
GGGCAATTCATATTTGCTGAATTATTTATTTCCTGCCTTCATTGCGCCATGGCATATTAT
AAACCGTTTTAAACCTTGTAATGTGTATATTCCTTACCGTAATTTTGTTTACTTAAAACT
AAGTTTATAAATAAAAAAGAATCGGTAAAA
| SMART |
Znf_C2H2_type (IPR013087) - T[150-173] 310.0 - T[182-209] 9.2 - T[215-239] 2.7E-5 - T[245-269] 0.49 - T[275-299] 5.0E-4 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[187-214] 11.468 - T[215-244] 16.768 - T[245-274] 12.404 - T[275-304] 11.489 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[196-252] 1.43E-19 - T[256-308] 9.55E-11 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[217-239] . - T[247-269] . - T[277-299] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZIC2_HUMAN | 65.152 % | 266 | 4.13E-83 |
| ZIC3_HUMAN | 59.494 % | 278 | 3.1E-88 |
| ZIC1_HUMAN | 51.361 % | 271 | 6.45E-86 |