- Transcript 'Cisavi.CG.ENS81.R60....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R60.147642-149276.08591.t
Possible name(s)
CCT3; CCT4; CCT5
Gene model
Location
R60 [147,641 / 149,276]
Amino acid sequence
Length: 544
>Cisavi.CG.ENS81.R60.147642-149276.08591.p
RTMSAPVLVLNQNSKRESGRKVQLGNVEAAKTIADVIRTCLGPRSMLKMLMDPMGGIVMT
NDGNAILREITVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMMVAAQQFLEQKMHPT
VIIAAYRKALDDMQEILTELSVDIDVTEKSEMRKIVKSAIGTKFINKWADLACDMAIKSV
STVVQQNKSTGRREIDIKRYAKVEKVPGGILEDSEVLDGVMLNKDITHPAMKRRIENPRI
LLLDCSLEYQKGESQTDMELSKDTDFEKILQMEEDYIKRVTSDVIAHKPDLVFTEKGISD
LAQYFLTKANITAIRRVRKSDNNRIARACGATVCSRTEEIREEDIGTGAGLFEVRKFGEE
YFTFITKCKDPKACTILLRGASKDILMEVERNLQDAMQVTRNVMINPQLLPGGGSVEMAV
AQRMKERSKSMTGVEQWPYRAVADALEIIPRTLVQNCGASTIRTITALRAKHATSGNETW
GVNGETGQIADMKALDVWEPLSVKLQTYKTAMETAMLLLRIDDIVSGSKKAEGGEGSGTA
APTH
Nucleotide sequence
Length: 1,635
>Cisavi.CG.ENS81.R60.147642-149276.08591.t
CGAACTATGTCAGCTCCGGTACTTGTGTTAAATCAGAATTCAAAGCGAGAATCTGGCCGT
AAAGTCCAACTTGGAAATGTTGAGGCTGCGAAAACCATAGCGGACGTTATCCGAACATGT
TTGGGACCGAGGTCGATGTTGAAAATGCTCATGGACCCGATGGGAGGGATCGTGATGACA
AACGACGGAAACGCGATTTTACGCGAGATCACCGTCCAACATCCGGCGGCAAAGTCGATG
ATCGAAATCAGTCGGACACAAGATGAGGAGGTGGGAGACGGAACTACATCAGTTATCATC
CTAGCTGGGGAGATGATGGTTGCTGCTCAACAGTTCTTGGAGCAAAAGATGCATCCAACT
GTGATCATCGCTGCGTACCGGAAAGCATTGGATGACATGCAGGAGATATTGACTGAACTT
AGTGTGGATATTGATGTGACGGAAAAGTCTGAGATGAGAAAGATCGTCAAAAGTGCGATC
GGAACCAAGTTTATCAATAAGTGGGCCGATCTGGCATGCGACATGGCTATCAAGTCTGTC
TCTACGGTTGTGCAACAAAATAAGAGCACTGGGCGTCGAGAAATTGATATCAAACGTTAT
GCCAAAGTAGAAAAAGTCCCTGGGGGAATTTTAGAAGATTCTGAGGTGTTGGATGGTGTG
ATGTTGAACAAAGATATCACGCATCCTGCAATGAAGAGAAGGATCGAAAACCCAAGAATC
TTGCTCCTAGATTGCTCATTGGAATACCAGAAAGGTGAAAGTCAGACTGACATGGAGCTT
AGTAAGGACACCGACTTTGAGAAGATCTTACAGATGGAGGAGGACTACATAAAGAGAGTT
ACAAGTGATGTCATAGCACACAAACCAGATCTCGTTTTCACTGAAAAGGGAATTTCCGAT
TTAGCTCAATATTTCTTGACAAAGGCAAATATCACAGCAATTCGCCGAGTCCGAAAATCT
GATAACAACCGGATTGCACGTGCGTGTGGTGCCACTGTGTGCTCAAGAACAGAAGAGATC
AGAGAGGAAGACATTGGAACGGGAGCTGGACTTTTTGAGGTTAGGAAGTTTGGAGAAGAA
TACTTTACTTTTATCACCAAGTGCAAGGATCCGAAAGCTTGCACCATCCTTCTTCGCGGA
GCCAGCAAGGATATTCTTATGGAGGTTGAGAGGAATCTGCAAGACGCGATGCAAGTTACA
AGGAACGTAATGATCAACCCACAACTTCTACCAGGAGGTGGATCCGTGGAAATGGCAGTT
GCTCAAAGGATGAAGGAAAGATCAAAATCAATGACTGGAGTTGAGCAGTGGCCGTACAGG
GCGGTTGCTGATGCATTGGAGATCATACCACGCACGCTGGTACAGAATTGTGGAGCGAGC
ACCATTAGAACCATTACTGCCTTGAGAGCCAAGCACGCTACAAGTGGTAACGAAACATGG
GGGGTGAATGGAGAAACCGGTCAAATTGCTGACATGAAAGCACTTGATGTGTGGGAGCCA
CTTTCGGTCAAACTTCAAACGTACAAGACGGCTATGGAGACAGCCATGTTGTTGCTAAGA
ATCGATGACATCGTGTCGGGATCAAAAAAAGCTGAGGGAGGGGAAGGATCCGGAACAGCC
GCTCCCACTCACTGA
| TIGRFAM |
Chap_CCT_gamma (IPR012719) - T[6-530] 5.3E-277 |
| CDD |
Chap_CCT_gamma (IPR012719) - T[6-527] 0.0 |
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[8-534] 6.4E-286 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[14-144] 8.5E-85 - T[407-527] 8.5E-85 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[26-143] 1.4E-179 - T[407-524] 1.4E-179 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[33-526] 4.4E-164 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[35-51] 1.0E-26 - T[57-75] 1.0E-26 - T[87-106] 1.0E-26 - T[375-397] 1.0E-26 - T[409-421] 1.0E-26 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[38-50] . - T[59-75] . - T[87-95] . |
| SUPERFAMILY |
TCP-1-like_intermed_sf (IPR027410) - T[144-217] 2.44E-24 - T[371-406] 2.44E-24 |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[144-217] 1.4E-179 - T[371-406] 1.4E-179 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[213-380] 1.12E-52 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[218-370] 1.4E-179 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPG_HUMAN | 70.95 % | 815 | 0 |
| TCPD_HUMAN | 32.108 % | 296 | 8.11E-94 |
| TCPE_HUMAN | 32.571 % | 284 | 2.59E-89 |