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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  2. Transcript 'Cisavi.CG.ENS81.R5.7...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R5.710663-713437.00874.t

Possible name(s)

SOX14; SOX2; SOX21

Gene model

Cisavi.CG.ENS81.R5.710663-713437

Location

R5 [710,662 / 713,353]

Sequences

Amino acid sequence

Length: 136

>Cisavi.CG.ENS81.R5.710663-713437.00874.p
MTASTPGSQGDIKPYIGESVHHGGNASHIVPSMMNHGSLNQNNNSSTNTKVAQEQRVKRP
MNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKTLSDSDKRPFIDEAKRLRALHMKE
HPLTPIANWSNVSTNH

Nucleotide sequence

Length: 897

>Cisavi.CG.ENS81.R5.710663-713437.00874.t
CACCTCCCCCCACCGGGCCCGATGACCGCTTCGACTCCAGGCTCGCAGGGAGACATCAAG
CCATACATCGGGGAATCCGTTCACCACGGCGGGAATGCGTCGCACATTGTCCCGTCGATG
ATGAACCACGGAAGTCTCAACCAGAACAACAATTCCTCAACCAACACGAAAGTGGCTCAA
GAACAAAGAGTGAAACGTCCAATGAACGCATTCATGGTGTGGTCACGTGGACAGCGTCGA
AAGATGGCACAGGACAATCCGAAAATGCACAACTCTGAGATTTCCAAACGCCTTGGAGCT
GAGTGGAAAACCCTTTCAGACTCTGATAAGCGACCTTTTATTGATGAAGCGAAAAGACTT
CGTGCACTTCACATGAAGGAACATCCACTCACACCAATTGCCAATTGGTCAAATGTATCT
ACCAATCACTGAGCAGCAGCCAGCCGCAGCCACCACACCAACCGACCCGGCCCATAGCCC
GGGACTTTCCCGTATGAACTCAATTGGTCCAGGAAGCCATTATCCCATATCAACCGCCAT
GGGGCAGCTGCCAATGCACATGCCTGCGCACATGTAAAGAGCAGAGCAATTCTTACACTC
AATGGAAAGTTCAAGGACCTGGGTTTGAAACTAACCTGTTGGGCTCGCGTGGTACCCAGG
GTCTCAGAAACGAAGGACACTAAAACCTATCACAGTAACATCAACCAGTTTTATTTTAAT
GTAATTTAAGCTATCGACTGTGATTATGTACATAAGCTATACATTCATAGCTCTATATTC
CAGCGGTGCTGGTCTAAATTGGTTCGTTGGCATTGATGTATGCTGTACCTTATAATGTGA
TACCAATGTTTTCATTGTACAGTTTTCGCCGCACGTGCCTTTTCCATTTAATTTTAA

InterProScan

SUPERFAMILY
HMG_box_dom_sf (IPR036910) - T[45-122] 2.49E-26
Gene3D
HMG_box_dom_sf (IPR036910) - T[54-126] 1.8E-27
SMART
HMG_box_dom (IPR009071) - T[56-126] 5.6E-24
ProSiteProfiles
HMG_box_dom (IPR009071) - T[57-125] 20.943
Pfam
HMG_box_dom (IPR009071) - T[57-122] 3.1E-26

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SOX2_HUMAN 92.537 % 137 8.33E-41
SOX14_HUMAN 87.879 % 131 5.11E-39
SOX1_HUMAN 87.324 % 138 2.05E-40