- Transcript 'Cisavi.CG.ENS81.R56....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R56.887939-897219.00204.t
Possible name(s)
TRAF4; TRAF5; TRAF6
Gene model
Location
R56 [887,938 / 897,219]
Amino acid sequence
Length: 246
>Cisavi.CG.ENS81.R56.887939-897219.00204.p
MATACKQYAMPSLEDNSVMINGAALDDETVGYDYEFLPSLDNKYMCPICLLALRDPVQTE
CGHRFCHLCILRCIRKKARCPVDQITLHSNQLFLDRSAQREVLDLKASCTNQGCEIVMEL
RNIKEHELHCPHRRSPCKNGCGLELLSQDLVFHEVNQCPRRTVTCPTCQQEYAFNMQKQH
EEDCKQFEPVVCEHCNHEVKRYKLKQHVSSECPQAPIKCVFHKVGCHEEYPRHDIKSHMD
STTQIH
Nucleotide sequence
Length: 783
>Cisavi.CG.ENS81.R56.887939-897219.00204.t
ATTTTTGGAAGTAGCATTTAACTACTTAACCTGAAATTGCAATTATGGCAACAGCTTGTA
AGCAGTATGCTATGCCTTCTTTAGAAGACAATAGCGTCATGATTAATGGTGCAGCACTGG
ATGATGAAACAGTTGGTTACGATTATGAGTTCTTACCTTCGCTGGATAACAAGTACATGT
GCCCGATATGCTTGCTAGCCCTGCGTGACCCTGTACAAACAGAATGTGGGCATAGATTTT
GTCACCTGTGTATTCTGCGATGTATCAGAAAAAAAGCAAGGTGCCCTGTCGACCAAATTA
CTCTTCATTCGAACCAACTCTTCCTGGACAGATCTGCACAGCGTGAGGTCTTGGACTTAA
AAGCATCATGCACCAACCAGGGGTGTGAAATAGTGATGGAATTAAGAAACATTAAGGAGC
ACGAGCTTCACTGCCCACATAGGAGATCGCCTTGTAAAAACGGATGTGGGCTCGAGTTGT
TATCACAGGATCTCGTGTTTCATGAGGTCAACCAGTGTCCTCGTCGCACAGTCACCTGTC
CAACCTGCCAACAAGAATACGCATTCAATATGCAAAAGCAACATGAAGAAGACTGCAAGC
AATTTGAGCCGGTGGTATGTGAACACTGCAACCATGAAGTTAAACGTTATAAGTTAAAGC
AACATGTGAGTTCAGAATGTCCGCAAGCGCCGATCAAATGCGTCTTTCACAAAGTGGGAT
GTCATGAAGAATACCCGCGACATGACATCAAATCACACATGGACAGCACCACCCAAATCC
ACC
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[27-138] 3.5E-27 - T[139-188] 7.0E-8 - T[189-245] 2.5E-6 |
| PANTHER |
TRAF6 (IPR027139) - T[31-196] 5.1E-47 - T[190-240] 5.1E-47 |
| SMART |
Znf_RING (IPR001841) - T[46-83] 1.4E-6 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[46-84] 11.589 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[61-70] . |
| SUPERFAMILY |
TRAF-like (IPR008974) - T[105-180] 7.85E-9 - T[190-240] 9.81E-5 |
| ProSiteProfiles |
Znf_TRAF (IPR001293) - T[153-236] 11.728 |
| Pfam |
Znf_TRAF (IPR001293) - T[180-238] 3.3E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRAF4_HUMAN | 33.333 % | 113 | 5.84E-29 |
| TRAF5_HUMAN | 31.897 % | 96.3 | 8.03E-23 |
| TRAF6_HUMAN | 41.593 % | 179 | 2.05E-53 |